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Virus Evolution|March 17, 2022
Phycova - a tool for exploring covariates of pathogen spreadTim Blokker, Guy Baele, Philippe Lemey, et al.Methods in Ecology and Evolution|September 28, 2020
nosoi: A stochastic agent-based transmission chain simulation framework in rSebastian Lequime, Paul Bastide, Simon Dellicour, et al.Current Opinion in Virology|September 25, 2018
Recent advances in computational phylodynamicsGuy Baele, Simon Dellicour, Marc A Suchard, et al.Virus Evolution|July 7, 2022
Accommodating sampling location uncertainty in continuous phylogeographySimon Dellicour, Philippe Lemey, Marc A Suchard, et al.Bioinformatics (Oxford, England)|June 15, 2013
Bayesian evolutionary model testing in the phylogenomics era: matching model complexity with computational efficiencyGuy Baele, Philippe LemeyJournal of Computational and Graphical Statistics : a Joint Publication of American Statistical Association, Institute of Mathematical Statistics, Interface Foundation of North America|June 25, 2021
Massive parallelization boosts big Bayesian multidimensional scalingAndrew J Holbrook, Philippe Lemey, Guy Baele, et al.BMC Bioinformatics|March 19, 2013
Make the most of your samples: Bayes factor estimators for high-dimensional models of sequence evolutionGuy Baele, Philippe Lemey, Stijn VansteelandtTravel Medicine and Infectious Disease|December 19, 2025
Dengue serotypes and epidemic dynamics in Brazil: a spatiotemporal perspectiveCamila Lorenz, Philippe Lemey, Simon DellicourVirus Evolution|November 3, 2022
SPREAD 4: online visualisation of pathogen phylogeographic reconstructionsKanika D Nahata, Filip Bielejec, Juan Monetta, et al.Medrxiv : the Preprint Server for Health Sciences|July 15, 2024
Dispersal history of SARS-CoV-2 variants Alpha, Delta, and Omicron (BA.1) in SpainPilar Gallego-García, Samuel L Hong, Nena Bollen, et al.Pageof 55