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Frontiers in Bioinformatics
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September 22, 2025
Adaptive sampling methods facilitate the determination of reliable dataset sizes for evidence-based modeling
Tim Breitenbach, Thomas Dandekar
Scientific Reports
|
June 6, 2026
DataXflowGen for GenAI-driven model generation
Samantha A W Crouch, Tim Breitenbach
International Journal of Molecular Sciences
|
May 5, 2019
How to Steer and Control ERK and the ERK Signaling Cascade Exemplified by Looking at Cardiac Insufficiency
Tim Breitenbach, Kristina Lorenz, Thomas Dandekar
Scientific Reports
|
August 10, 2021
An effective model of endogenous clocks and external stimuli determining circadian rhythms
Tim Breitenbach, Charlotte Helfrich-Förster, Thomas Dandekar
Bioinformatics (Oxford, England)
|
July 9, 2022
Optimization of synthetic molecular reporters for a mesenchymal glioblastoma transcriptional program by integer programing
Tim Breitenbach, Matthias Jürgen Schmitt, Thomas Dandekar
Plos Computational Biology
|
July 17, 2019
Analyzing pharmacological intervention points: A method to calculate external stimuli to switch between steady states in regulatory networks
Tim Breitenbach, Chunguang Liang, Niklas Beyersdorf, et al.
Computational and Structural Biotechnology Journal
|
August 18, 2025
gSELECT: A novel pre-analysis machine-learning library enabling early hypothesis testing and predictive gene selection in single-cell data
Deniz Caliskan, Aylin Caliskan, Thomas Dandekar, et al.
Computational and Structural Biotechnology Journal
|
May 6, 2024
DataXflow: Synergizing data-driven modeling with best parameter fit and optimal control - An efficient data analysis for cancer research
Samantha A W Crouch, Jan Krause, Thomas Dandekar, et al.
Plos One
|
April 17, 2024
An orchestra of machine learning methods reveals landmarks in single-cell data exemplified with aging fibroblasts
Lauritz Rasbach, Aylin Caliskan, Fatemeh Saderi, et al.
Computational and Structural Biotechnology Journal
|
June 19, 2023
Optimized cell type signatures revealed from single-cell data by combining principal feature analysis, mutual information, and machine learning
Aylin Caliskan, Deniz Caliskan, Lauritz Rasbach, et al.
Page
of 2
Search research articles
Search
Showing results (1-10 of 14) with videos related to
Sort By:
Page
of 2
Frontiers in Bioinformatics
|
September 22, 2025
Adaptive sampling methods facilitate the determination of reliable dataset sizes for evidence-based modeling
Tim Breitenbach, Thomas Dandekar
Scientific Reports
|
June 6, 2026
DataXflowGen for GenAI-driven model generation
Samantha A W Crouch, Tim Breitenbach
International Journal of Molecular Sciences
|
May 5, 2019
How to Steer and Control ERK and the ERK Signaling Cascade Exemplified by Looking at Cardiac Insufficiency
Tim Breitenbach, Kristina Lorenz, Thomas Dandekar
Scientific Reports
|
August 10, 2021
An effective model of endogenous clocks and external stimuli determining circadian rhythms
Tim Breitenbach, Charlotte Helfrich-Förster, Thomas Dandekar
Bioinformatics (Oxford, England)
|
July 9, 2022
Optimization of synthetic molecular reporters for a mesenchymal glioblastoma transcriptional program by integer programing
Tim Breitenbach, Matthias Jürgen Schmitt, Thomas Dandekar
Plos Computational Biology
|
July 17, 2019
Analyzing pharmacological intervention points: A method to calculate external stimuli to switch between steady states in regulatory networks
Tim Breitenbach, Chunguang Liang, Niklas Beyersdorf, et al.
Computational and Structural Biotechnology Journal
|
August 18, 2025
gSELECT: A novel pre-analysis machine-learning library enabling early hypothesis testing and predictive gene selection in single-cell data
Deniz Caliskan, Aylin Caliskan, Thomas Dandekar, et al.
Computational and Structural Biotechnology Journal
|
May 6, 2024
DataXflow: Synergizing data-driven modeling with best parameter fit and optimal control - An efficient data analysis for cancer research
Samantha A W Crouch, Jan Krause, Thomas Dandekar, et al.
Plos One
|
April 17, 2024
An orchestra of machine learning methods reveals landmarks in single-cell data exemplified with aging fibroblasts
Lauritz Rasbach, Aylin Caliskan, Fatemeh Saderi, et al.
Computational and Structural Biotechnology Journal
|
June 19, 2023
Optimized cell type signatures revealed from single-cell data by combining principal feature analysis, mutual information, and machine learning
Aylin Caliskan, Deniz Caliskan, Lauritz Rasbach, et al.
Page
of 2