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Bioinformatics (Oxford, England)|December 24, 2025
Reconstructing and comparing signal transduction networks from single-cell protein quantification dataTim Stohn, Roderick van Eijl, Klaas W Mulder, et al.Molecular & Cellular Proteomics : MCP|February 18, 2026
Cell-state specific drug-responses are associated with differences in signaling network wiringNiels Krämer, Roderick van Eijl, Tim Stohn, et al.Translational Oncology|December 23, 2019
RUNX2/CBFB modulates the response to MEK inhibitors through activation of receptor tyrosine kinases in KRAS-mutant colorectal cancerTonći Šuštić, Evert Bosdriesz, Sake van Wageningen, et al.Iscience|August 22, 2022
Identifying mutant-specific multi-drug combinations using comparative network reconstructionEvert Bosdriesz, João M Fernandes Neto, Anja Sieber, et al.Bioinformatics (Oxford, England)|June 23, 2018
Modelling signalling networks from perturbation dataMathurin Dorel, Bertram Klinger, Torsten Gross, et al.Bioinformatics (Oxford, England)|November 14, 2018
Comparative Network Reconstruction using mixed integer programmingEvert Bosdriesz, Anirudh Prahallad, Bertram Klinger, et al.Genome Medicine|November 29, 2018
A role for the unfolded protein response stress sensor ERN1 in regulating the response to MEK inhibitors in KRAS mutant colon cancersTonći Šuštić, Sake van Wageningen, Evert Bosdriesz, et al.Plos One|March 14, 2020
Approximating multivariate posterior distribution functions from Monte Carlo samples for sequential Bayesian inferenceBram Thijssen, Lodewyk F A WesselsCell Research|May 26, 2018
MAP3K1 and MAP2K4 mutations are associated with sensitivity to MEK inhibitors in multiple cancer modelsZheng Xue, Daniel J Vis, Alejandra Bruna, et al.Plos Computational Biology|November 1, 2018
Molecular characterization of breast and lung tumors by integration of multiple data types with functional sparse-factor analysisTycho Bismeijer, Sander Canisius, Lodewyk F A WesselsPageof 23