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Molecular Biology and Evolution|December 9, 2017
A Molecular Portrait of De Novo Genes in YeastsNikolaos Vakirlis, Alex S Hebert, Dana A Opulente, et al.Nucleic Acids Research|May 31, 2023
Active in vivo translocation of the Methanosarcina mazei Gö1 CasposonFinn O Gehlert, Lisa Nickel, Nikolaos Vakirlis, et al.Bioinformatics Advances|October 31, 2025
Advances and challenges in understanding evolution through genome comparison: meeting report of the European Molecular Biology Organization (EMBO) lecture course "Evolutionary and Comparative Genomics"Athina Gavriilidou, Alexandros Stamatakis, Anne Kupczok, et al.Plos Computational Biology|January 29, 2025
Spherical harmonics texture extraction for versatile analysis of biological objectsOane Gros, Josiah B Passmore, Noa O Borst, et al.Nature|October 15, 2020
Dense and pleiotropic regulatory information in a developmental enhancerTimothy Fuqua, Jeff Jordan, Maria Elize van Breugel, et al.Pathogens (Basel, Switzerland)|September 28, 2021
Interlaboratory Comparison Study on Ribodepleted Total RNA High-Throughput Sequencing for Plant Virus Diagnostics and Bioinformatic CompetenceYahya Z A Gaafar, Marcel Westenberg, Marleen Botermans, et al.Developmental Cell|January 10, 2023
Enhancer architecture and chromatin accessibility constrain phenotypic space during Drosophila developmentRafael Galupa, Gilberto Alvarez-Canales, Noa Ottilie Borst, et al.Nature Communications|February 9, 2020
De novo emergence of adaptive membrane proteins from thymine-rich genomic sequencesNikolaos Vakirlis, Omer Acar, Brian Hsu, et al.Genome Research|June 2, 2016
Reconstruction of ancestral chromosome architecture and gene repertoire reveals principles of genome evolution in a model yeast genusNikolaos Vakirlis, Véronique Sarilar, Guénola Drillon, et al.Pageof 3