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Peerj|May 19, 2016
PhySortR: a fast, flexible tool for sorting phylogenetic trees in RTimothy G Stephens, Debashish Bhattacharya, Mark A Ragan, et al.Scientific Reports|November 23, 2018
Core genes in diverse dinoflagellate lineages include a wealth of conserved dark genes with unknown functionsTimothy G Stephens, Mark A Ragan, Debashish Bhattacharya, et al.Trends in Ecology & Evolution|May 16, 2019
Genome Evolution of Coral Reef Symbionts as Intracellular ResidentsRaúl A González-Pech, Debashish Bhattacharya, Mark A Ragan, et al.Trends in Microbiology|March 1, 2022
Genome-powered classification of microbial eukaryotes: focus on coral algal symbiontsKatherine E Dougan, Raúl A González-Pech, Timothy G Stephens, et al.BMC Biology|May 26, 2020
Genomes of the dinoflagellate Polarella glacialis encode tandemly repeated single-exon genes with adaptive functionsTimothy G Stephens, Raúl A González-Pech, Yuanyuan Cheng, et al.Trends in Ecology & Evolution|November 12, 2023
Facultative lifestyle drives diversity of coral algal symbiontsDebashish Bhattacharya, Timothy G Stephens, Erin E Chille, et al.Journal of Phycology|November 13, 2019
Evidence That Inconsistent Gene Prediction Can Mislead Analysis of Dinoflagellate GenomesYibi Chen, Raúl A González-Pech, Timothy G Stephens, et al.Mobile Genetic Elements|January 30, 2014
Analysis of horizontal genetic transfer in red algae in the post-genomics ageCheong Xin Chan, Debashish BhattacharyaCommunicative & Integrative Biology|October 8, 2011
Non-random sharing of Plantae genesCheong Xin Chan, Debashish BhattacharyaJournal of Molecular Evolution|July 24, 2013
Biological intuition in alignment-free methods: response to PosadaMark A Ragan, Cheong Xin ChanPageof 38