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Iscience|September 12, 2022
Loss of key endosymbiont genes may facilitate early host control of the chromatophore in <i>Paulinella</i>Arwa Gabr, Timothy G Stephens, Debashish BhattacharyaJournal of Phycology|March 7, 2022
Hypothesis: Trans-splicing Generates Evolutionary Novelty in the Photosynthetic Amoeba PaulinellaArwa Gabr, Timothy G Stephens, Debashish BhattacharyaGenome Biology and Evolution|March 24, 2026
Cosmopolitan gene families with known functions are hotspots for the evolution of novel genes in stony coralsTimothy G Stephens, Arkadiusz W Kulczyk, Debashish BhattacharyaVirus Evolution|November 16, 2022
Multiple waves of viral invasions in Symbiodiniaceae algal genomesL Felipe Benites, Timothy G Stephens, Debashish BhattacharyaEnvironmental Microbiology|February 3, 2025
Genetic Transfer in Action: Uncovering DNA Flow in an Extremophilic Microbial CommunityJulia Van Etten, Timothy G Stephens, Debashish BhattacharyaSystematic Biology|June 14, 2023
A k-mer-Based Approach for Phylogenetic Classification of Taxa in Environmental Genomic DataJulia Van Etten, Timothy G Stephens, Debashish BhattacharyaIscience|September 11, 2023
Peeling back the layers of coral holobiont multi-omics dataAmanda Williams, Timothy G Stephens, Alexander Shumaker, et al.Scientific Reports|November 23, 2018
Core genes in diverse dinoflagellate lineages include a wealth of conserved dark genes with unknown functionsTimothy G Stephens, Mark A Ragan, Debashish Bhattacharya, et al.Biorxiv : the Preprint Server for Biology|April 3, 2026
In <i>Staphylococcus aureus</i> , MbcS is a refunctionalized acyl-CoA synthetase that confers a fitness advantage during intra-species competitionMarcelle C Dos Santos Ferreira, Timothy G Stephens, Shaun R BrinsmadePeerj|May 19, 2016
PhySortR: a fast, flexible tool for sorting phylogenetic trees in RTimothy G Stephens, Debashish Bhattacharya, Mark A Ragan, et al.Pageof 5