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Physical Biology|June 19, 2015
Model reduction for stochastic CaMKII reaction kinetics in synapses by graph-constrained correlation dynamicsTodd Johnson, Tom Bartol, Terrence Sejnowski, et al.The Journal of General Physiology|July 21, 2019
Dendritic spine geometry and spine apparatus organization govern the spatiotemporal dynamics of calciumMiriam Bell, Tom Bartol, Terrence Sejnowski, et al.The Journal of Chemical Physics|July 25, 2018
Learning dynamic Boltzmann distributions as reduced models of spatial chemical kineticsOliver K Ernst, Thomas Bartol, Terrence Sejnowski, et al.Arxiv|May 5, 2025
Synaptic Spine Head Morphodynamics from Graph Grammar Rules for Actin DynamicsMatthew Hur, Thomas Bartol, Padmini Rangamani, et al.Plos Computational Biology|July 18, 2020
Interactions between calmodulin and neurogranin govern the dynamics of CaMKII as a leaky integratorMariam Ordyan, Tom Bartol, Mary Kennedy, et al.Neuroinformatics|October 9, 2013
VolRoverN: enhancing surface and volumetric reconstruction for realistic dynamical simulation of cellular and subcellular functionJohn Edwards, Eric Daniel, Justin Kinney, et al.Annals of the New York Academy of Sciences|November 20, 2003
The computational selfTerrence SejnowskiJournal of Bioinformatics and Computational Biology|July 20, 2007
On cooperative quasi-equilibrium models of transcriptional regulationEric MjolsnessBulletin of Mathematical Biology|June 9, 2019
Prospects for Declarative Mathematical Modeling of Complex Biological SystemsEric MjolsnessBriefings in Bioinformatics|July 21, 2007
Towards a calculus of biomolecular complexes at equilibriumEric MjolsnessPageof 11