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Tommi Mäklin

Showing results (1-10 of 18) with videos related to

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Methods in Molecular Biology (Clifton, N.J.)|July 22, 2018
Identifying Bacterial Strains from Sequencing DataTommi Mäklin, Jukka Corander, Antti Honkela
Bioinformatics (Oxford, England)|June 30, 2023
Themisto: a scalable colored k-mer index for sensitive pseudoalignment against hundreds of thousands of bacterial genomesJarno N Alanko, Jaakko Vuohtoniemi, Tommi Mäklin, et al.
Microbiology Resource Announcements|June 3, 2021
Closing Clostridium botulinum Group III Genomes Using Long-Read SequencingCedric Woudstra, Tommi Mäklin, Yagmur Derman, et al.
Nature Communications|November 4, 2025
Basic reproduction number varies markedly between closely related pandemic Escherichia coli clonesFanni Ojala, Henri Pesonen, Rebecca A Gladstone, et al.
Microbial Genomics|November 15, 2021
Bacterial genomic epidemiology with mixed samplesTommi Mäklin, Teemu Kallonen, Jarno Alanko, et al.
The Lancet. Microbe|December 7, 2024
Geographical variation in the incidence of colorectal cancer and urinary tract cancer is associated with population exposure to colibactin-producing Escherichia coliTommi Mäklin, Aurora Taira, Sergio Arredondo-Alonso, et al.
Microbial Genomics|February 11, 2026
Sequence type and strain-level detection of <i>Klebsiella pneumoniae</i> in culture-enriched bacterial metagenomes: comparative performance of mSWEEP and StrainGE bioinformatic toolsDorota Julia Buczek, Wasifa Kabir, Kenneth Lindstedt, et al.
Viruses|December 23, 2023
A Novel Prophage-like Insertion Element within <i>yabG</i> Triggers Early Entry into Sporulation in <i>Clostridium botulinum</i>François P Douillard, Inês Martins Portinha, Yağmur Derman, et al.
Mbio|May 2, 2022
Genomic and Phenotypic Characterization of Clostridium botulinum Isolates from an Infant Botulism Case Suggests Adaptation Signatures to the GutFrançois P Douillard, Yağmur Derman, Cédric Woudstra, et al.
Genome Research|October 15, 2024
Seamless, rapid, and accurate analyses of outbreak genomic data using split <i>k</i>-mer analysisRomain Derelle, Johanna von Wachsmann, Tommi Mäklin, et al.
Pageof 2

Showing results (1-10 of 18) with videos related to

Sort By:
Pageof 2
Methods in Molecular Biology (Clifton, N.J.)|July 22, 2018
Identifying Bacterial Strains from Sequencing DataTommi Mäklin, Jukka Corander, Antti Honkela
Bioinformatics (Oxford, England)|June 30, 2023
Themisto: a scalable colored k-mer index for sensitive pseudoalignment against hundreds of thousands of bacterial genomesJarno N Alanko, Jaakko Vuohtoniemi, Tommi Mäklin, et al.
Microbiology Resource Announcements|June 3, 2021
Closing Clostridium botulinum Group III Genomes Using Long-Read SequencingCedric Woudstra, Tommi Mäklin, Yagmur Derman, et al.
Nature Communications|November 4, 2025
Basic reproduction number varies markedly between closely related pandemic Escherichia coli clonesFanni Ojala, Henri Pesonen, Rebecca A Gladstone, et al.
Microbial Genomics|November 15, 2021
Bacterial genomic epidemiology with mixed samplesTommi Mäklin, Teemu Kallonen, Jarno Alanko, et al.
The Lancet. Microbe|December 7, 2024
Geographical variation in the incidence of colorectal cancer and urinary tract cancer is associated with population exposure to colibactin-producing Escherichia coliTommi Mäklin, Aurora Taira, Sergio Arredondo-Alonso, et al.
Microbial Genomics|February 11, 2026
Sequence type and strain-level detection of <i>Klebsiella pneumoniae</i> in culture-enriched bacterial metagenomes: comparative performance of mSWEEP and StrainGE bioinformatic toolsDorota Julia Buczek, Wasifa Kabir, Kenneth Lindstedt, et al.
Viruses|December 23, 2023
A Novel Prophage-like Insertion Element within <i>yabG</i> Triggers Early Entry into Sporulation in <i>Clostridium botulinum</i>François P Douillard, Inês Martins Portinha, Yağmur Derman, et al.
Mbio|May 2, 2022
Genomic and Phenotypic Characterization of Clostridium botulinum Isolates from an Infant Botulism Case Suggests Adaptation Signatures to the GutFrançois P Douillard, Yağmur Derman, Cédric Woudstra, et al.
Genome Research|October 15, 2024
Seamless, rapid, and accurate analyses of outbreak genomic data using split <i>k</i>-mer analysisRomain Derelle, Johanna von Wachsmann, Tommi Mäklin, et al.
Pageof 2