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Proceedings of the National Academy of Sciences of the United States of America|February 14, 2002
RNA hairpin-folding kineticsWenbing Zhang, Shi-Jie ChenBiophysical Journal|November 8, 2005
Exploring the complex folding kinetics of RNA hairpins: II. Effect of sequence, length, and misfolded statesWenbing Zhang, Shi-Jie ChenBiophysical Journal|March 29, 2018
Hexahydrated Mg2+ Binding and Outer-Shell Dehydration on RNA SurfaceTao Yu, Shi-Jie ChenThe Journal of Chemical Physics|December 17, 2008
Analyzing the biopolymer folding rates and pathways using kinetic cluster methodWenbing Zhang, Shi-Jie ChenThe Journal of Chemical Physics|June 25, 2010
Computing the conformational entropy for RNA foldsLiang Liu, Shi-Jie ChenRNA (New York, N.Y.)|October 27, 2011
Structure and stability of RNA/RNA kissing complex: with application to HIV dimerization initiation signalSong Cao, Shi-Jie ChenRNA Biology|March 16, 2012
A domain-based model for predicting large and complex pseudoknotted structuresSong Cao, Shi-Jie ChenRNA (New York, N.Y.)|October 28, 2005
Predicting RNA folding thermodynamics with a reduced chain representation modelSong Cao, Shi-Jie ChenThe Journal of Physical Chemistry. B|December 21, 2017
Hierarchical Assembly of RNA Three-Dimensional Structures Based on Loop TemplatesXiaojun Xu, Shi-Jie ChenPageof 18