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Frontiers in Molecular Biosciences|July 19, 2021
RNA 3D Structure Prediction Using Coarse-Grained ModelsJun Li, Shi-Jie Chen
The Journal of Chemical Physics|December 17, 2008
Master equation approach to finding the rate-limiting steps in biopolymer foldingWenbing Zhang, Shi-Jie Chen
Artificial Intelligence Chemistry|March 4, 2024
Advances in machine-learning approaches to RNA-targeted drug designYuanzhe Zhou, Shi-Jie Chen
The Journal of Chemical Physics|August 10, 2014
Many-body effect in ion binding to RNAYuhong Zhu, Shi-Jie Chen
Nucleic Acids and Molecular Biology|June 14, 2016
Statistical mechanical modeling of RNA folding: from free energy landscape to tertiary structural predictionSong Cao, Shi-Jie Chen
Biophysical Journal|November 8, 2005
Exploring the complex folding kinetics of RNA hairpins: I. General folding kinetics analysisWenbing Zhang, Shi-Jie Chen
Methods in Molecular Biology (Clifton, N.J.)|September 26, 2016
A Method to Predict the Structure and Stability of RNA/RNA ComplexesXiaojun Xu, Shi-Jie Chen
Nucleic Acids Research|March 3, 2023
RNAJP: enhanced RNA 3D structure predictions with non-canonical interactions and global topology samplingJun Li, Shi-Jie Chen
Computational and Structural Biotechnology Journal|July 2, 2025
Computational modeling of cotranscriptional RNA foldingLei Jin, Shi-Jie Chen
RNA Nanomed|April 9, 2025
Harnessing Computational Approaches for RNA-Targeted Drug DiscoveryYuanzhe Zhou, Shi-Jie Chen
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