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Nucleic Acids Research|June 5, 2010
PLAST-ncRNA: Partition function Local Alignment Search Tool for non-coding RNA sequencesSatish Chikkagoudar, Dennis R Livesay, Usman RoshanBMC Bioinformatics|January 30, 2008
Searching for evolutionary distant RNA homologs within genomic sequences using partition function posterior probabilitiesUsman Roshan, Satish Chikkagoudar, Dennis R LivesayNucleic Acids Research|May 9, 2007
eProbalign: generation and manipulation of multiple sequence alignments using partition function posterior probabilitiesSatish Chikkagoudar, Usman Roshan, Dennis LivesayBioinformatics (Oxford, England)|September 7, 2006
Probalign: multiple sequence alignment using partition function posterior probabilitiesUsman Roshan, Dennis R LivesayNucleic Acids Research|February 15, 2011
Ranking causal variants and associated regions in genome-wide association studies by the support vector machine and random forestUsman Roshan, Satish Chikkagoudar, Zhi Wei, et al.BMC Bioinformatics|October 19, 2007
Assessing the ability of sequence-based methods to provide functional insight within membrane integral proteins: a case study analyzing the neurotransmitter/Na+ symporter familyDennis R Livesay, Patrick D Kidd, Sepehr Eskandari, et al.BMC Research Notes|May 28, 2011
GENIE: a software package for gene-gene interaction analysis in genetic association studies using multiple GPU or CPU coresSatish Chikkagoudar, Kai Wang, Mingyao LiChemistry Central Journal|October 18, 2007
At the crossroads of biomacromolecular research: highlighting the interdisciplinary nature of the fieldDennis R LivesayProtein Engineering, Design & Selection : PEDS|August 18, 2004
Conserved sequence and structure association motifs in antibody-protein and antibody-hapten complexesDennis R Livesay, Shankar SubramaniamBMC Bioinformatics|May 15, 2007
How accurate and statistically robust are catalytic site predictions based on closeness centrality?Eric Chea, Dennis R LivesayPageof 6