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Journal of Chemical Information and Modeling
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September 3, 2025
Evolutionary Constraints Guide AlphaFold2 in Predicting Alternative Conformations and Inform Rational Mutation Design
Valerio Piomponi, Alberto Cazzaniga, Francesca Cuturello
The Journal of Physical Chemistry. B
|
September 6, 2024
Molecular Simulations to Investigate the Impact of N6-Methylation in RNA Recognition: Improving Accuracy and Precision of Binding Free Energy Prediction
Valerio Piomponi, Miroslav Krepl, Jiri Sponer, et al.
ACS Central Science
|
August 29, 2022
Molecular Simulations Matching Denaturation Experiments for N<sup>6</sup>-Methyladenosine
Valerio Piomponi, Thorben Fröhlking, Mattia Bernetti, et al.
The Journal of Chemical Physics
|
May 15, 2025
MDRefine: A Python package for refining molecular dynamics trajectories with experimental data
Ivan Gilardoni, Valerio Piomponi, Thorben Fröhlking, et al.
Journal of Chemical Theory and Computation
|
February 28, 2023
Alchemical Metadynamics: Adding Alchemical Variables to Metadynamics to Enhance Sampling in Free Energy Calculations
Wei-Tse Hsu, Valerio Piomponi, Pascal T Merz, et al.
Nucleic Acids Research
|
June 26, 2025
Unique conformational dynamics and protein recognition of A-to-I hyper-edited dsRNA
Christoph Müller-Hermes, Valerio Piomponi, Stefan Hilber, et al.
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of 1
Search research articles
Search
Showing results (1-10 of 6) with videos related to
Sort By:
Page
of 1
Journal of Chemical Information and Modeling
|
September 3, 2025
Evolutionary Constraints Guide AlphaFold2 in Predicting Alternative Conformations and Inform Rational Mutation Design
Valerio Piomponi, Alberto Cazzaniga, Francesca Cuturello
The Journal of Physical Chemistry. B
|
September 6, 2024
Molecular Simulations to Investigate the Impact of N6-Methylation in RNA Recognition: Improving Accuracy and Precision of Binding Free Energy Prediction
Valerio Piomponi, Miroslav Krepl, Jiri Sponer, et al.
ACS Central Science
|
August 29, 2022
Molecular Simulations Matching Denaturation Experiments for N<sup>6</sup>-Methyladenosine
Valerio Piomponi, Thorben Fröhlking, Mattia Bernetti, et al.
The Journal of Chemical Physics
|
May 15, 2025
MDRefine: A Python package for refining molecular dynamics trajectories with experimental data
Ivan Gilardoni, Valerio Piomponi, Thorben Fröhlking, et al.
Journal of Chemical Theory and Computation
|
February 28, 2023
Alchemical Metadynamics: Adding Alchemical Variables to Metadynamics to Enhance Sampling in Free Energy Calculations
Wei-Tse Hsu, Valerio Piomponi, Pascal T Merz, et al.
Nucleic Acids Research
|
June 26, 2025
Unique conformational dynamics and protein recognition of A-to-I hyper-edited dsRNA
Christoph Müller-Hermes, Valerio Piomponi, Stefan Hilber, et al.
Page
of 1