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Annual Review of Genomics and Human Genetics|May 24, 2022
Extrachromosomal DNA in CancerVineet Bafna, Paul S MischelCurrent Opinion in Genetics & Development|January 21, 2021
Extrachromosomal DNA (ecDNA) in cancer pathogenesisSihan Wu, Vineet Bafna, Paul S MischelNature Reviews. Cancer|March 16, 2019
Extrachromosomal oncogene amplification in tumour pathogenesis and evolutionRoel G W Verhaak, Vineet Bafna, Paul S MischelAnnual Review of Pathology|November 9, 2021
Extrachromosomal DNA: An Emerging Hallmark in Human CancerSihan Wu, Vineet Bafna, Howard Y Chang, et al.Nucleic Acids Research|March 27, 2018
ViFi: accurate detection of viral integration and mRNA fusion reveals indiscriminate and unregulated transcription in proximal genomic regions in cervical cancerNam-Phuong D Nguyen, Viraj Deshpande, Jens Luebeck, et al.Biorxiv : the Preprint Server for Biology|May 10, 2023
Transcriptional immune suppression and upregulation of double stranded DNA damage and repair repertoires in ecDNA-containing tumorsMiin S Lin, Se-Young Jo, Jens Luebeck, et al.Elife|June 19, 2024
Transcriptional immune suppression and up-regulation of double-stranded DNA damage and repair repertoires in ecDNA-containing tumorsMiin S Lin, Se-Young Jo, Jens Luebeck, et al.Nature Communications|January 25, 2019
Exploring the landscape of focal amplifications in cancer using AmpliconArchitectViraj Deshpande, Jens Luebeck, Nam-Phuong D Nguyen, et al.Cell Systems|June 17, 2019
Computing the Statistical Significance of Overlap between Genome Annotations with iStatShahab Sarmashghi, Vineet BafnaProceedings. IEEE Computational Systems Bioinformatics Conference|February 2, 2006
FastR: fast database search tool for non-coding RNAVineet Bafna, Shaojie ZhangPageof 39