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Bioinformatics (Oxford, England)|May 26, 2017
Flexbar 3.0 - SIMD and multicore parallelizationJohannes T Roehr, Christoph Dieterich, Knut ReinertBMC Bioinformatics|July 31, 2007
Accurate multiple sequence-structure alignment of RNA sequences using combinatorial optimizationMarkus Bauer, Gunnar W Klau, Knut ReinertIEEE/ACM Transactions on Computational Biology and Bioinformatics|April 6, 2011
Antilope--a Lagrangian relaxation approach to the de novo peptide sequencing problemSandro Andreotti, Gunnar W Klau, Knut ReinertMethods in Molecular Biology (Clifton, N.J.)|March 4, 2011
Bioinformatics for qualitative and quantitative proteomicsChris Bielow, Clemens Gröpl, Oliver Kohlbacher, et al.Methods in Molecular Biology (Clifton, N.J.)|November 11, 2010
OpenMS and TOPP: open source software for LC-MS data analysisAndreas Bertsch, Clemens Gröpl, Knut Reinert, et al.Journal of Proteome Research|April 30, 2011
MSSimulator: Simulation of mass spectrometry dataChris Bielow, Stephan Aiche, Sandro Andreotti, et al.NAR Genomics and Bioinformatics|April 18, 2025
TetRex: a novel algorithm for index-accelerated search of highly conserved motifsRemy M Schwab, Simon Gene Gottlieb, Knut ReinertBMC Bioinformatics|April 10, 2014
Genome alignment with graph data structures: a comparisonBirte Kehr, Kathrin Trappe, Manuel Holtgrewe, et al.BMC Bioinformatics|January 7, 2022
LaRA 2: parallel and vectorized program for sequence-structure alignment of RNA sequencesJörg Winkler, Gianvito Urgese, Elisa Ficarra, et al.BMC Bioinformatics|January 11, 2008
SeqAn an efficient, generic C++ library for sequence analysisAndreas Döring, David Weese, Tobias Rausch, et al.Pageof 12