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International Journal of Molecular Sciences|November 9, 2024
An Accurate and Efficient Approach to Knowledge Extraction from Scientific Publications Using Structured Ontology Models, Graph Neural Networks, and Large Language ModelsTimofey V Ivanisenko, Pavel S Demenkov, Vladimir A IvanisenkoMethods in Molecular Biology (Clifton, N.J.)|April 1, 2008
Web-based computational tools for the prediction and analysis of post-translational modifications of proteinsVladimir A Ivanisenko, Dmitry A Afonnikov, Nikolay A KolchanovNucleic Acids Research|June 28, 2005
WebProAnalyst: an interactive tool for analysis of quantitative structure-activity relationships in protein familiesVladimir A Ivanisenko, Alexey M Eroshkin, Nickolay A KolchanovJournal of Molecular Graphics & Modelling|September 27, 2017
Regression model for predicting pathogenic properties of SOD1 mutants based on the analysis of conformational stability and conservation of hydrogen bondsNikolay A Alemasov, Nikita V Ivanisenko, Vladimir A IvanisenkoBMC Genomics|December 24, 2015
Computer analysis of protein functional sites projection on exon structure of genes in MetazoaIrina V Medvedeva, Pavel S Demenkov, Vladimir A IvanisenkoJournal of Bioinformatics and Computational Biology|January 24, 2017
SITEX 2.0: Projections of protein functional sites on eukaryotic genes. Extension with orthologous genesIrina V Medvedeva, Pavel S Demenkov, Vladimir A IvanisenkoJournal of Molecular Graphics & Modelling|March 2, 2020
Learning the changes of barnase mutants thermostability from structural fluctuations obtained using anisotropic network modelingNikolay A Alemasov, Nikita V Ivanisenko, Vladimir A IvanisenkoBMC Genetics|October 23, 2020
The story of the lost twins: decoding the genetic identities of the Kumhar and Kurcha populations from the Indian subcontinentRanajit Das, Vladimir A Ivanisenko, Anastasia A Anashkina, et al.International Journal of Molecular Sciences|June 24, 2022
Plant Biology and Biotechnology: Focus on Genomics and BioinformaticsYuriy L Orlov, Vladimir A Ivanisenko, Oxana B Dobrovolskaya, et al.BMC Structural Biology|February 13, 2018
Molecular mechanisms underlying the impact of mutations in SOD1 on its conformational properties associated with amyotrophic lateral sclerosis as revealed with molecular modellingNikolay A Alemasov, Nikita V Ivanisenko, Srinivasan Ramachandran, et al.Pageof 8