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May 9, 2019
MS2 bacteriophage capsid studied using all-atom molecular dynamics
Vladimir S Farafonov, Dmitry Nerukh
Journal of Chemical Theory and Computation
|
April 8, 2017
Developing and Validating a Set of All-Atom Potential Models for Sodium Dodecyl Sulfate
Vladimir S Farafonov, Alexander V Lebed
Faraday Discussions
|
August 2, 2022
Reconstruction and validation of entire virus model with complete genome from mixed resolution cryo-EM density
Vladimir S Farafonov, Michael Stich, Dmitry Nerukh
Journal of Chemical Theory and Computation
|
October 19, 2023
Complete Virion Simulated: All-Atom Model of an MS2 Bacteriophage with Native Genome
Vladimir S Farafonov, Michael Stich, Dmitry A Nerukh
Journal of Chemical Theory and Computation
|
August 14, 2020
Computing p<i>K</i><sub>a</sub> Shifts Using Traditional Molecular Dynamics: Example of Acid-Base Indicator Dyes in Organized Solutions
Vladimir S Farafonov, Alexander V Lebed, Nikolay O Mchedlov-Petrossyan
Langmuir : the ACS Journal of Surfaces and Colloids
|
July 20, 2017
Character of Localization and Microenvironment of Solvatochromic Reichardt's Betaine Dye in Sodium n-Dodecyl Sulfate and Cetyltrimethylammonium Bromide Micelles: Molecular Dynamics Simulation Study
Vladimir S Farafonov, Alexander V Lebed, Nikolay O Mchedlov-Petrossyan
The Journal of Physical Chemistry. B
|
January 19, 2023
Estimation of Nanoparticle's Surface Electrostatic Potential in Solution Using Acid-Base Molecular Probes I: <i>In Silico</i> Implementation for Surfactant Micelles
Vladimir S Farafonov, Alexander V Lebed, Dmitry A Nerukh, et al.
The Journal of Physical Chemistry. B
|
January 19, 2023
Estimation of Nanoparticle's Surface Electrostatic Potential in Solution Using Acid-Base Molecular Probes II: Insight from Atomistic Simulations of Micelles
Vladimir S Farafonov, Alexander V Lebed, Dmitry A Nerukh, et al.
Journal of Molecular Graphics & Modelling
|
June 17, 2024
Impact of mutations in SARS-CoV-2 recombinant sub-variant XBB.1.16 on the binding affinity with human ACE2 receptor
Syeda Sumayya Tariq, Komal Zia, Mohammad Nur-E-Alam, et al.
The Journal of Physical Chemistry Letters
|
October 7, 2021
Graphene Oxide of Extra High Oxidation: A Wafer for Loading Guest Molecules
Abdelsattar O E Abdelhalim, Vladimir V Sharoyko, Sergei V Ageev, et al.
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Search research articles
Search
Showing results (1-10 of 11) with videos related to
Sort By:
Page
of 2
Interface Focus
|
May 9, 2019
MS2 bacteriophage capsid studied using all-atom molecular dynamics
Vladimir S Farafonov, Dmitry Nerukh
Journal of Chemical Theory and Computation
|
April 8, 2017
Developing and Validating a Set of All-Atom Potential Models for Sodium Dodecyl Sulfate
Vladimir S Farafonov, Alexander V Lebed
Faraday Discussions
|
August 2, 2022
Reconstruction and validation of entire virus model with complete genome from mixed resolution cryo-EM density
Vladimir S Farafonov, Michael Stich, Dmitry Nerukh
Journal of Chemical Theory and Computation
|
October 19, 2023
Complete Virion Simulated: All-Atom Model of an MS2 Bacteriophage with Native Genome
Vladimir S Farafonov, Michael Stich, Dmitry A Nerukh
Journal of Chemical Theory and Computation
|
August 14, 2020
Computing p<i>K</i><sub>a</sub> Shifts Using Traditional Molecular Dynamics: Example of Acid-Base Indicator Dyes in Organized Solutions
Vladimir S Farafonov, Alexander V Lebed, Nikolay O Mchedlov-Petrossyan
Langmuir : the ACS Journal of Surfaces and Colloids
|
July 20, 2017
Character of Localization and Microenvironment of Solvatochromic Reichardt's Betaine Dye in Sodium n-Dodecyl Sulfate and Cetyltrimethylammonium Bromide Micelles: Molecular Dynamics Simulation Study
Vladimir S Farafonov, Alexander V Lebed, Nikolay O Mchedlov-Petrossyan
The Journal of Physical Chemistry. B
|
January 19, 2023
Estimation of Nanoparticle's Surface Electrostatic Potential in Solution Using Acid-Base Molecular Probes I: <i>In Silico</i> Implementation for Surfactant Micelles
Vladimir S Farafonov, Alexander V Lebed, Dmitry A Nerukh, et al.
The Journal of Physical Chemistry. B
|
January 19, 2023
Estimation of Nanoparticle's Surface Electrostatic Potential in Solution Using Acid-Base Molecular Probes II: Insight from Atomistic Simulations of Micelles
Vladimir S Farafonov, Alexander V Lebed, Dmitry A Nerukh, et al.
Journal of Molecular Graphics & Modelling
|
June 17, 2024
Impact of mutations in SARS-CoV-2 recombinant sub-variant XBB.1.16 on the binding affinity with human ACE2 receptor
Syeda Sumayya Tariq, Komal Zia, Mohammad Nur-E-Alam, et al.
The Journal of Physical Chemistry Letters
|
October 7, 2021
Graphene Oxide of Extra High Oxidation: A Wafer for Loading Guest Molecules
Abdelsattar O E Abdelhalim, Vladimir V Sharoyko, Sergei V Ageev, et al.
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