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Journal of Proteome Research|April 10, 2010
Peptidomics coming of age: a review of contributions from a bioinformatics angleGerben Menschaert, Tom T M Vandekerckhove, Geert Baggerman, et al.Molecular & Cellular Proteomics : MCP|February 23, 2013
Deep proteome coverage based on ribosome profiling aids mass spectrometry-based protein and peptide discovery and provides evidence of alternative translation products and near-cognate translation initiation eventsGerben Menschaert, Wim Van Criekinge, Tineke Notelaers, et al.Journal of Proteome Research|September 17, 2013
Improving the identification rate of endogenous peptides using electron transfer dissociation and collision-induced dissociationEisuke Hayakawa, Gerben Menschaert, Pieter-Jan De Bock, et al.Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences|June 26, 2019
Multiple solvent elution, a method to counter the effects of coelution and ion suppression in LC-MS analysis in bottom up proteomicsHarshavardhan Budamgunta, Evelyne Maes, Hanny Willems, et al.Proteomics|August 7, 2009
Spectral clustering in peptidomics studies helps to unravel modification profile of biologically active peptides and enhances peptide identification rateGerben Menschaert, Tom T M Vandekerckhove, Bart Landuyt, et al.Molecular & Cellular Proteomics : MCP|May 2, 2019
PROTEOFORMER 2.0: Further Developments in the Ribosome Profiling-assisted Proteogenomic Hunt for New ProteoformsSteven Verbruggen, Elvis Ndah, Wim Van Criekinge, et al.Frontiers in Genetics|November 11, 2021
Identification of Non-Canonical Translation Products in <i>C. elegans</i> Using Tandem Mass SpectrometryBhavesh S Parmar, Marlies K R Peeters, Kurt Boonen, et al.Plos One|March 5, 2011
Diversity in protein glycosylation among insect speciesGianni Vandenborre, Guy Smagghe, Bart Ghesquière, et al.Nature Communications|February 2, 2025
Deep learning to decode sites of RNA translation in normal and cancerous tissuesJim Clauwaert, Zahra McVey, Ramneek Gupta, et al.Journal of Proteome Research|May 24, 2017
Noncoding after All: Biases in Proteomics Data Do Not Explain Observed Absence of lncRNA Translation ProductsKenneth Verheggen, Pieter-Jan Volders, Pieter Mestdagh, et al.Pageof 7