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BMC Structural Biology|April 3, 2007
Atomic hydration potentials using a Monte Carlo Reference State (MCRS) for protein solvation modelingSergei V Rakhmanov, Vsevolod J MakeevAdvances in Protein Chemistry and Structural Biology|June 25, 2013
DNA sequence motif: a jack of all trades for ChIP-Seq dataIvan V Kulakovskiy, Vsevolod J MakeevGene|February 24, 2005
Evolution of transcription factor DNA binding sitesEkaterina A Kotelnikova, Vsevolod J Makeev, Mikhail S GelfandBiology Direct|March 24, 2016
Preservation of methylated CpG dinucleotides in human CpG islandsAlexander Y Panchin, Vsevolod J Makeev, Yulia A MedvedevaBioinformatics (Oxford, England)|July 17, 2009
Motif discovery and motif finding from genome-mapped DNase footprint dataIvan V Kulakovskiy, Alexander V Favorov, Vsevolod J MakeevBiochemical and Biophysical Research Communications|November 13, 2007
In vitro selection of optimal RelB/p52 DNA-binding motifsLiudmila V Britanova, Vsevolod J Makeev, Dmitry V KuprashAlgorithms for Molecular Biology : AMB|October 1, 2013
Jaccard index based similarity measure to compare transcription factor binding site modelsIlya E Vorontsov, Ivan V Kulakovskiy, Vsevolod J MakeevF1000Research|July 18, 2022
Positional weight matrices have sufficient prediction power for analysis of noncoding variantsAlexandr Boytsov, Sergey Abramov, Vsevolod J Makeev, et al.BMC Evolutionary Biology|July 31, 2007
A model of evolution with constant selective pressure for regulatory DNA sitesFarida N Enikeeva, Ekaterina A Kotelnikova, Mikhail S Gelfand, et al.Nucleic Acids Research|October 8, 2003
Distance preferences in the arrangement of binding motifs and hierarchical levels in organization of transcription regulatory informationVsevolod J Makeev, Alexander P Lifanov, Anna G Nazina, et al.Pageof 7