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Bioinformatics (Oxford, England)|May 8, 2024
Chainsaw: protein domain segmentation with fully convolutional neural networksJude Wells, Alex Hawkins-Hooker, Nicola Bordin, et al.
Gigascience|December 10, 2024
Learning a generalized graph transformer for protein function prediction in dissimilar sequencesYiwei Fu, Zhonghui Gu, Xiao Luo, et al.
Bioinformatics (Oxford, England)|July 3, 2026
TEDLH: Domain HMMs for sensitive detection of remote homologuesClaudia Alvarez-Carreño, Anton S Petrov, Vaishali P Waman, et al.
Comptes Rendus Biologies|November 14, 2009
ENFIN--A European network for integrative systems biologyPascal Kahlem, Andrew Clegg, Florian Reisinger, et al.
Genome Biology|November 13, 2004
Consensus clustering and functional interpretation of gene-expression dataStephen Swift, Allan Tucker, Veronica Vinciotti, et al.
Nucleic Acids Research|February 5, 2013
Evolutionary history of the TBP-domain superfamilyBjörn Brindefalk, Benoit H Dessailly, Corin Yeats, et al.
Protein Science : a Publication of the Protein Society|October 28, 2024
BEAN and HABAS: Polyphyletic insertions in the DNA-directed RNA polymeraseClaudia Alvarez-Carreño, Angela T Huynh, Anton S Petrov, et al.
Briefings in Bioinformatics|May 31, 2022
Characterizing and explaining the impact of disease-associated mutations in proteins without known structures or structural homologsNeeladri Sen, Ivan Anishchenko, Nicola Bordin, et al.
Human Mutation|August 26, 2003
Trimethylaminuria and a human FMO3 mutation databaseDiana Hernandez, Sarah Addou, David Lee, et al.
Bioinformatics (Oxford, England)|May 12, 2021
Clustering FunFams using sequence embeddings improves EC purityMaria Littmann, Nicola Bordin, Michael Heinzinger, et al.
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