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Bioinformatics Advances|July 19, 2024
Network depth affects inference of gene sets from bacterial transcriptomes using denoising autoencodersWillow Kion-Crosby, Lars BarquistMsystems|November 1, 2023
Ribosome profiling reveals the fine-tuned response of <i>Escherichia coli</i> to mild and severe acid stressKilian Schumacher, Rick Gelhausen, Willow Kion-Crosby, et al.The Journal of Chemical Physics|December 10, 2015
Path statistics, memory, and coarse-graining of continuous-time random walks on networksMichael Manhart, Willow Kion-Crosby, Alexandre V MorozovNature Communications|July 5, 2020
Dual RNA-seq of Orientia tsutsugamushi informs on host-pathogen interactions for this neglected intracellular human pathogenBozena Mika-Gospodorz, Suparat Giengkam, Alexander J Westermann, et al.Annual Review of Genetics|October 17, 2015
Accelerating Discovery and Functional Analysis of Small RNAs with New TechnologiesLars Barquist, Jörg VogelNucleic Acids Research|June 5, 2008
xREI: a phylo-grammar visualization webserverLars Barquist, Ian HolmesNature Communications|May 10, 2022
Marginal speed confinement resolves the conflict between correlation and control in collective behaviourAndrea Cavagna, Antonio Culla, Xiao Feng, et al.Microlife|May 24, 2023
Ushering in a new era of single-cell transcriptomics in bacteriaChristina Homberger, Lars Barquist, Jörg VogelBioinformatics (Oxford, England)|January 31, 2012
HandAlign: Bayesian multiple sequence alignment, phylogeny and ancestral reconstructionOscar Westesson, Lars Barquist, Ian HolmesPageof 10