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Bioinformatics (Oxford, England)|April 25, 2018
DEsingle for detecting three types of differential expression in single-cell RNA-seq dataZhun Miao, Ke Deng, Xiaowo Wang, et al.Briefings in Bioinformatics|July 8, 2025
Advancing genetic engineering with active learning: theory, implementations and potential opportunitiesQixiu Du, Haochen Wang, Benben Jiang, et al.Bioinformatics (Oxford, England)|May 21, 2025
esMPRA: an easy-to-use systematic pipeline for MPRA experiment quality control and data analysisJiaqi Li, Pengcheng Zhang, Xi Xi, et al.Science China. Life Sciences|December 27, 2013
Sequence signatures of genes with accompanying antisense transcripts in Saccharomyces cerevisiaeYingxue Li, Xuening Liu, Xiaowo Wang, et al.BMC Bioinformatics|May 17, 2022
DeSP: a systematic DNA storage error simulation pipelineLekang Yuan, Zhen Xie, Ye Wang, et al.Bioinformatics (Oxford, England)|November 27, 2007
Identification of phylogenetically conserved microRNA cis-regulatory elements across 12 Drosophila speciesXiaowo Wang, Jin Gu, Michael Q Zhang, et al.Aging|June 25, 2018
Regulatory RNA binding proteins contribute to the transcriptome-wide splicing alterations in human cellular senescenceQiongye Dong, Lei Wei, Michael Q Zhang, et al.Nature Communications|February 19, 2025
Systematic representation and optimization enable the inverse design of cross-species regulatory sequences in bacteriaPengcheng Zhang, Qixiu Du, Ye Wang, et al.Bioinformatics (Oxford, England)|October 27, 2009
DEGseq: an R package for identifying differentially expressed genes from RNA-seq dataLikun Wang, Zhixing Feng, Xi Wang, et al.Bioinformatics (Oxford, England)|March 10, 2018
esATAC: an easy-to-use systematic pipeline for ATAC-seq data analysisZheng Wei, Wei Zhang, Huan Fang, et al.Pageof 9