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Briefings in Bioinformatics|January 22, 2025
GOPhage: protein function annotation for bacteriophages by integrating the genomic contextJiaojiao Guan, Yongxin Ji, Cheng Peng, et al.
Gigascience|December 20, 2024
PlasGO: enhancing GO-based function prediction for plasmid-encoded proteins based on genetic structureYongxin Ji, Jiayu Shang, Jiaojiao Guan, et al.
Molecular Biology and Evolution|August 13, 2024
SegVir: Reconstruction of Complete Segmented RNA Viral Genomes from MetatranscriptomesXubo Tang, Jiayu Shang, Guowei Chen, et al.
Bioinformatics (Oxford, England)|September 24, 2024
Accurate and efficient protein embedding using multi-teacher distillation learningJiayu Shang, Cheng Peng, Yongxin Ji, et al.
Environmental Research|June 11, 2025
Dissecting the gut microbial communities and resistomes of wild rats from different ecological areas in Hong KongCaifang Wen, Jiaojiao Guan, Theethawat Uea-Anuwong, et al.
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing|December 17, 2011
MetaDomain: a profile HMM-based protein domain classification tool for short sequencesYuan Zhang, Yanni Sun
BMC Bioinformatics|March 15, 2006
Choosing the best heuristic for seeded alignment of DNA sequencesYanni Sun, Jeremy Buhler
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