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Plos Computational Biology|August 18, 2025
3D structure and stability prediction of DNA with multi-way junctions in ionic solutionsXunxun Wang, Ya-Zhou Shi
Biophysical Journal|November 19, 2021
rsRNASP: A residue-separation-based statistical potential for RNA 3D structure evaluationYa-Lan Tan, Xunxun Wang, Ya-Zhou Shi, et al.
Biophysical Journal|March 16, 2023
Predicting 3D structures and stabilities for complex RNA pseudoknots in ion solutionsXunxun Wang, Ya-Lan Tan, Shixiong Yu, et al.
Nucleic Acids Research|January 14, 2026
TiRNA: a coarse-grained method with temperature and ion effects for RNA structure folding and predictionXunxun Wang, Zouchenyu Zhou, Shixiong Yu, et al.
RNA (New York, N.Y.)|August 9, 2019
Structure folding of RNA kissing complexes in salt solutions: predicting 3D structure, stability, and folding pathwayLei Jin, Ya-Lan Tan, Yao Wu, et al.
The American Journal of Gastroenterology|December 21, 2002
Telomerase expression and p53 status in hepatocellular carcinomaTakashi Kobayashi, Yasuhiko Sugawara, Ya-Zhou Shi, et al.
Frontiers in Genetics|November 1, 2021
SS-RNN: A Strengthened Skip Algorithm for Data Classification Based on Recurrent Neural NetworksWenjie Cao, Ya-Zhou Shi, Huahai Qiu, et al.
NAR Genomics and Bioinformatics|March 7, 2023
cgRNASP: coarse-grained statistical potentials with residue separation for RNA structure evaluationYa-Lan Tan, Xunxun Wang, Shixiong Yu, et al.
Molecules (Basel, Switzerland)|July 29, 2023
RNA 3D Structure Prediction: Progress and PerspectiveXunxun Wang, Shixiong Yu, En Lou, et al.
Biophysical Journal|August 18, 2022
FebRNA: An automated fragment-ensemble-based model for building RNA 3D structuresLi Zhou, Xunxun Wang, Shixiong Yu, et al.
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