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Photosynthesis Research|March 28, 2022
Comparison of proton transfer paths to the Q<sub>A</sub> and Q<sub>B</sub> sites of the Rb. sphaeroides photosynthetic reaction centersRongmei Judy Wei, Yingying Zhang, Junjun Mao, et al.Photosynthesis Research|October 28, 2022
Tools for analyzing protonation states and for tracing proton transfer pathways with examples from the Rb. sphaeroides photosynthetic reaction centersRongmei Judy Wei, Umesh Khaniya, Junjun Mao, et al.Methods in Molecular Biology (Clifton, N.J.)|July 24, 2021
Poor Person's pH Simulation of Membrane ProteinsChitrak Gupta, Umesh Khaniya, John W Vant, et al.Biochimica Et Biophysica Acta. Bioenergetics|June 13, 2020
Hydrogen bond network analysis reveals the pathway for the proton transfer in the E-channel of T. thermophilus Complex IUmesh Khaniya, Chitrak Gupta, Xiuhong Cai, et al.Biochimica Et Biophysica Acta. Bioenergetics|June 13, 2020
Identifying the proton loading site cluster in the ba<sub>3</sub> cytochrome c oxidase that loads and traps protonsXiuhong Cai, Chang Yun Son, Junjun Mao, et al.Journal of Computer-Aided Molecular Design|June 25, 2021
Evaluation of log P, pK<sub>a</sub>, and log D predictions from the SAMPL7 blind challengeTeresa Danielle Bergazin, Nicolas Tielker, Yingying Zhang, et al.Biochimica Et Biophysica Acta. Bioenergetics|October 23, 2024
Finding the E-channel proton loading sites by calculating the ensemble of protonation microstatesMd Raihan Uddin, Umesh Khaniya, Chitrak Gupta, et al.Physical Biology|February 8, 2017
The design features cells use to build their transmembrane proton gradientM R Gunner, Ronald KoderBiochemistry|August 13, 2010
Multiconformation continuum electrostatics analysis of the effects of a buried Asp introduced near heme a in Rhodobacter sphaeroides cytochrome c oxidaseJun Zhang, M R GunnerPageof 27