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Source Code for Biology and Medicine|April 18, 2013
The non-negative matrix factorization toolbox for biological data miningYifeng Li, Alioune NgomIEEE/ACM Transactions on Computational Biology and Bioinformatics|August 10, 2013
Nonnegative least-squares methods for the classification of high-dimensional biological dataYifeng Li, Alioune NgomBMC Systems Biology|February 26, 2014
Sparse representation approaches for the classification of high-dimensional biological dataYifeng Li, Alioune NgomBriefings in Bioinformatics|December 25, 2016
A review on machine learning principles for multi-view biological data integrationYifeng Li, Fang-Xiang Wu, Alioune NgomIEEE/ACM Transactions on Computational Biology and Bioinformatics|September 4, 2015
The Max-Min High-Order Dynamic Bayesian Network for Learning Gene Regulatory Networks with Time-Delayed RegulationsYifeng Li, Haifen Chen, Jie Zheng, et al.Frontiers in Pharmacology|August 18, 2025
PolyLLM: polypharmacy side effect prediction via LLM-based SMILES encodingsSadra Hakim, Alioune NgomBMC Bioinformatics|March 4, 2015
The relative vertex clustering value--a new criterion for the fast discovery of functional modules in protein interaction networksZina M Ibrahim, Alioune NgomBioinformatics (Oxford, England)|December 7, 2021
A network-based drug repurposing method via non-negative matrix factorizationShaghayegh Sadeghi, Jianguo Lu, Alioune NgomFrontiers in Pharmacology|July 25, 2022
An Integrative Heterogeneous Graph Neural Network-Based Method for Multi-Labeled Drug RepurposingShaghayegh Sadeghi, Jianguo Lu, Alioune NgomBMC Bioinformatics|April 21, 2022
Computationally repurposing drugs for breast cancer subtypes using a network-based approachForough Firoozbakht, Iman Rezaeian, Luis Rueda, et al.Pageof 27