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Plos Computational Biology|February 3, 2026
BiCLUM: Bilateral contrastive learning for unpaired single-cell multi-omics integrationYin Guo, Izaskun Mallona, Mark D Robinson, et al.Nucleic Acids Research|September 10, 2025
Harnessing the potential of spatial statistics for spatial omics data with pastaMartin Emons, Samuel Gunz, Helena L Crowell, et al.BMC Genomics|March 23, 2017
Truke, a web tool to check for and handle excel misidentified gene symbolsIzaskun Mallona, Miguel A PeinadoPlos Computational Biology|November 13, 2025
Building a continuous benchmarking ecosystem in bioinformaticsIzaskun Mallona, Charlotte Soneson, Ben Carrillo, et al.BMC Bioinformatics|October 22, 2011
pcrEfficiency: a Web tool for PCR amplification efficiency predictionIzaskun Mallona, Julia Weiss, Marcos Egea-CortinesPlant Physiology|June 17, 2011
Conserved and divergent rhythms of crassulacean acid metabolism-related and core clock gene expression in the cactus Opuntia ficus-indicaIzaskun Mallona, Marcos Egea-Cortines, Julia WeissSource Code for Biology and Medicine|September 27, 2014
Methylation plotter: a web tool for dynamic visualization of DNA methylation dataIzaskun Mallona, Anna Díez-Villanueva, Miguel A PeinadoJournal of Biomedical Informatics|February 2, 2016
A knowledgebase of the human Alu repetitive elementsIzaskun Mallona, Mireia Jordà, Miguel A PeinadoMethods in Molecular Biology (Clifton, N.J.)|April 2, 2018
The Pancancer DNA Methylation Trackhub: A Window to The Cancer Genome Atlas Epigenomics DataIzaskun Mallona, Alberto Sierco, Miguel A PeinadoEpigenetics & Chromatin|June 27, 2015
Wanderer, an interactive viewer to explore DNA methylation and gene expression data in human cancerAnna Díez-Villanueva, Izaskun Mallona, Miguel A PeinadoPageof 78