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The Journal of Chemical Physics|April 24, 2015
Dynamic force matching: A method for constructing dynamical coarse-grained models with realistic time dependenceAram Davtyan, James F Dama, Gregory A Voth, et al.Journal of Chemical Theory and Computation|November 21, 2015
Exploring Valleys without Climbing Every Peak: More Efficient and Forgiving Metabasin Metadynamics via Robust On-the-Fly Bias Domain RestrictionJames F Dama, Glen M Hocky, Rui Sun, et al.Journal of Chemical Theory and Computation|October 26, 2018
Ultra-Coarse-Grained Liquid State Models with Implicit Hydrogen BondingJaehyeok Jin, Yining Han, Gregory A VothThe Journal of Chemical Physics|February 28, 2021
Constructing many-body dissipative particle dynamics models of fluids from bottom-up coarse-grainingYining Han, Jaehyeok Jin, Gregory A VothJournal of Chemical Theory and Computation|November 20, 2015
The Theory of Ultra-Coarse-Graining. 2. Numerical ImplementationAram Davtyan, James F Dama, Anton V Sinitskiy, et al.The Journal of Chemical Physics|February 23, 2026
A bottom-up field-theoretic framework via hierarchical coarse-graining: Generalized mode theoryJaehyeok Jin, Yining Han, Gregory A VothThe Journal of Chemical Physics|July 1, 2019
Coarse-graining of many-body path integrals: Theory and numerical approximationsWon Hee Ryu, Yining Han, Gregory A VothThe Journal of Chemical Physics|August 1, 2016
On the representability problem and the physical meaning of coarse-grained modelsJacob W Wagner, James F Dama, Aleksander E P Durumeric, et al.Journal of Chemical Theory and Computation|September 7, 2016
Transition-Tempered Metadynamics Is a Promising Tool for Studying the Permeation of Drug-like Molecules through MembranesRui Sun, James F Dama, Jeffrey S Tan, et al.The Journal of Chemical Physics|March 17, 2018
Quantum theory of multiscale coarse-grainingYining Han, Jaehyeok Jin, Jacob W Wagner, et al.Pageof 50