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Bioinformatics (Oxford, England)|June 29, 2018
Enumerating consistent sub-graphs of directed acyclic graphs: an insight into biomedical ontologiesYisu Peng, Yuxiang Jiang, Predrag RadivojacBioinformatics (Oxford, England)|June 28, 2024
An algorithm for decoy-free false discovery rate estimation in XL-MS/MS proteomicsYisu Peng, Shantanu Jain, Predrag RadivojacBioinformatics (Oxford, England)|August 28, 2014
The impact of incomplete knowledge on the evaluation of protein function prediction: a structured-output learning perspectiveYuxiang Jiang, Wyatt T Clark, Iddo Friedberg, et al.Bioinformatics (Oxford, England)|December 31, 2020
New mixture models for decoy-free false discovery rate estimation in mass spectrometry proteomicsYisu Peng, Shantanu Jain, Yong Fuga Li, et al.Cell Systems|June 16, 2022
Advancing remote homology detection: A step toward understanding and accurately predicting protein functionPredrag RadivojacHuman Genetics|September 22, 2021
Prioritizing de novo autism risk variants with calibrated gene- and variant-scoring modelsYuxiang Jiang, Jorge Urresti, Kymberleigh A Pagel, et al.Methods in Molecular Biology (Clifton, N.J.)|November 5, 2016
Community-Wide Evaluation of Computational Function PredictionIddo Friedberg, Predrag RadivojacBioinformatics (Oxford, England)|September 6, 2012
Post-translational modifications induce significant yet not extreme changes to protein structureFuxiao Xin, Predrag RadivojacCurrent Protein & Peptide Science|July 27, 2011
Computational methods for identification of functional residues in protein structuresFuxiao Xin, Predrag RadivojacBMC Bioinformatics|November 27, 2012
Computational approaches to protein inference in shotgun proteomicsYong Fuga Li, Predrag RadivojacPageof 22