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Journal of Computational Chemistry
|
July 23, 2025
Reduction-Induced Structural and Motional Changes of Plant-Type Ferredoxin Using Molecular Dynamics and Umbrella Sampling Simulations
Tomoki Nakayoshi, Yusuke Ohnishi, Hideaki Tanaka, et al.
The Journal of Biological Chemistry
|
January 13, 2016
Direct Interaction between the Voltage Sensors Produces Cooperative Sustained Deactivation in Voltage-gated H+ Channel Dimers
Hiroko Okuda, Yasushige Yonezawa, Yu Takano, et al.
Scientific Reports
|
March 3, 2022
Development of a one-step analysis method for several amino acids using a microfluidic paper-based analytical device
Akimitsu Kugimiya, Sho Wakimoto, Jiro Kohda, et al.
Journal of the American Chemical Society
|
June 16, 2005
Mechanistic insights in charge-transfer-induced luminescence of 1,2-dioxetanones with a substituent of low oxidation potential
Hiroshi Isobe, Yu Takano, Mitsutaka Okumura, et al.
Journal of Chemical Theory and Computation
|
November 24, 2015
Molecular Dynamics Simulations Accelerated by GPU for Biological Macromolecules with a Non-Ewald Scheme for Electrostatic Interactions
Tadaaki Mashimo, Yoshifumi Fukunishi, Narutoshi Kamiya, et al.
Protein Engineering, Design & Selection : PEDS
|
June 24, 2016
Elastic properties of dynein motor domain obtained from all-atom molecular dynamics simulations
Narutoshi Kamiya, Tadaaki Mashimo, Yu Takano, et al.
Journal of Chemical Information and Modeling
|
February 14, 2022
Global Analysis of Heme Proteins Elucidates the Correlation between Heme Distortion and the Heme-Binding Pocket
Hiroko X Kondo, Masanori Fujii, Takuma Tanioka, et al.
International Journal of Molecular Sciences
|
December 23, 2022
Effects of Active-Center Reduction of Plant-Type Ferredoxin on Its Structure and Dynamics: Computational Analysis Using Molecular Dynamics Simulations
Tomoki Nakayoshi, Yusuke Ohnishi, Hideaki Tanaka, et al.
Biomolecules
|
January 21, 2023
Prediction of Protein Function from Tertiary Structure of the Active Site in Heme Proteins by Convolutional Neural Network
Hiroko X Kondo, Hiroyuki Iizuka, Gen Masumoto, et al.
Biomolecules
|
September 23, 2022
Elucidation of the Correlation between Heme Distortion and Tertiary Structure of the Heme-Binding Pocket Using a Convolutional Neural Network
Hiroko X Kondo, Hiroyuki Iizuka, Gen Masumoto, et al.
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Search research articles
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Showing results (31-40 of 59) with videos related to
Sort By:
Page
of 6
Journal of Computational Chemistry
|
July 23, 2025
Reduction-Induced Structural and Motional Changes of Plant-Type Ferredoxin Using Molecular Dynamics and Umbrella Sampling Simulations
Tomoki Nakayoshi, Yusuke Ohnishi, Hideaki Tanaka, et al.
The Journal of Biological Chemistry
|
January 13, 2016
Direct Interaction between the Voltage Sensors Produces Cooperative Sustained Deactivation in Voltage-gated H+ Channel Dimers
Hiroko Okuda, Yasushige Yonezawa, Yu Takano, et al.
Scientific Reports
|
March 3, 2022
Development of a one-step analysis method for several amino acids using a microfluidic paper-based analytical device
Akimitsu Kugimiya, Sho Wakimoto, Jiro Kohda, et al.
Journal of the American Chemical Society
|
June 16, 2005
Mechanistic insights in charge-transfer-induced luminescence of 1,2-dioxetanones with a substituent of low oxidation potential
Hiroshi Isobe, Yu Takano, Mitsutaka Okumura, et al.
Journal of Chemical Theory and Computation
|
November 24, 2015
Molecular Dynamics Simulations Accelerated by GPU for Biological Macromolecules with a Non-Ewald Scheme for Electrostatic Interactions
Tadaaki Mashimo, Yoshifumi Fukunishi, Narutoshi Kamiya, et al.
Protein Engineering, Design & Selection : PEDS
|
June 24, 2016
Elastic properties of dynein motor domain obtained from all-atom molecular dynamics simulations
Narutoshi Kamiya, Tadaaki Mashimo, Yu Takano, et al.
Journal of Chemical Information and Modeling
|
February 14, 2022
Global Analysis of Heme Proteins Elucidates the Correlation between Heme Distortion and the Heme-Binding Pocket
Hiroko X Kondo, Masanori Fujii, Takuma Tanioka, et al.
International Journal of Molecular Sciences
|
December 23, 2022
Effects of Active-Center Reduction of Plant-Type Ferredoxin on Its Structure and Dynamics: Computational Analysis Using Molecular Dynamics Simulations
Tomoki Nakayoshi, Yusuke Ohnishi, Hideaki Tanaka, et al.
Biomolecules
|
January 21, 2023
Prediction of Protein Function from Tertiary Structure of the Active Site in Heme Proteins by Convolutional Neural Network
Hiroko X Kondo, Hiroyuki Iizuka, Gen Masumoto, et al.
Biomolecules
|
September 23, 2022
Elucidation of the Correlation between Heme Distortion and Tertiary Structure of the Heme-Binding Pocket Using a Convolutional Neural Network
Hiroko X Kondo, Hiroyuki Iizuka, Gen Masumoto, et al.
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of 6