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Briefings in Bioinformatics|May 20, 2022
CHERRY: a Computational metHod for accuratE pRediction of virus-pRokarYotic interactions using a graph encoder-decoder modelJiayu Shang, Yanni SunBioinformatics (Oxford, England)|October 29, 2022
HaploDMF: viral haplotype reconstruction from long reads via deep matrix factorizationDehan Cai, Jiayu Shang, Yanni SunIEEE/ACM Transactions on Computational Biology and Bioinformatics|November 16, 2011
Designing filters for fast-known NcRNA identificationYanni Sun, Jeremy Buhler, Cheng YuanBioinformatics (Oxford, England)|September 26, 2024
VirTAXA: enhancing RNA virus taxonomic classification with remote homology search and tree-based validationYilin Zhu, Guowei Chen, Yanni SunBioinformatics (Oxford, England)|January 7, 2023
AccuVIR: an ACCUrate VIRal genome assembly tool for third-generation sequencing dataRunzhou Yu, Dehan Cai, Yanni SunMedical Science Monitor : International Medical Journal of Experimental and Clinical Research|August 21, 2019
SOX18 Affects Cell Viability, Migration, Invasiveness, and Apoptosis in Hepatocellular Carcinoma (HCC) Cells by Participating in Epithelial-to-Mesenchymal Transition (EMT) Progression and Adenosine Monophosphate Activated Protein Kinase (AMPK)/Mammalian Target of Rapamycin (mTOR)Yanni Sun, Bo Lei, Qingxian HuangThe Journal of Gene Medicine|July 31, 2020
Circ_0000105 promotes liver cancer by regulating miR-498/PIK3R1Yanni Sun, Xiuxiang Sun, Qingxian HuangGigascience|August 22, 2024
RNAVirHost: a machine learning-based method for predicting hosts of RNA viruses through viral genomesGuowei Chen, Jingzhe Jiang, Yanni SunBioinformatics (Oxford, England)|December 12, 2023
GDmicro: classifying host disease status with GCN and deep adaptation network based on the human gut microbiome dataHerui Liao, Jiayu Shang, Yanni SunMobile DNA|October 19, 2024
Accelerating de novo SINE annotation in plant and animal genomesHerui Liao, Yanni Sun, Shujun OuPageof 878