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Plos Computational Biology|December 10, 2009
Inferring binding energies from selected binding sitesYue Zhao, David Granas, Gary D StormoG3 (Bethesda, Md.)|March 31, 2026
Autoregulation of three yeast ribosomal protein genes by splicing inhibitionDavid Granas, Anirudh Kesanapally, Michael A White, et al.Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology|July 11, 2007
Putting numbers on the network connectionsGary D Stormo, Yue ZhaoNature Reviews. Genetics|September 30, 2010
Determining the specificity of protein-DNA interactionsGary D Stormo, Yue ZhaoNucleic Acids Research|July 31, 2025
Autoregulation of RPL7B by inhibition of a structural splicing enhancerDavid Granas, Ishan Gammadde Hewa, Michael A White, et al.Biorxiv : the Preprint Server for Biology|April 16, 2025
Autoregulation of RPL7B by inhibition of a structural splicing enhancerDavid Granas, Ishan Gammadde Hewa, Michael A White, et al.Science Advances|November 22, 2017
Measuring quantitative effects of methylation on transcription factor-DNA binding affinityZheng Zuo, Basab Roy, Yiming Kenny Chang, et al.Genetics|April 17, 2012
Improved models for transcription factor binding site identification using nonindependent interactionsYue Zhao, Shuxiang Ruan, Manishi Pandey, et al.Communications Biology|December 14, 2020
Autoregulation of yeast ribosomal proteins discovered by efficient search for feedback regulationBasab Roy, David Granas, Fredrick Bragg, et al.G3 (Bethesda, Md.)|April 23, 2013
Identification of cilia genes that affect cell-cycle progression using whole-genome transcriptome analysis in Chlamydomonas reinhardttiAlison J Albee, Alan L Kwan, Huawen Lin, et al.Pageof 413