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The ISME Journal|December 3, 2011
An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaeaDaniel McDonald, Morgan N Price, Julia Goodrich, et al.Mbio|November 15, 2018
Identifying and Predicting Novelty in Microbiome StudiesXiaoquan Su, Gongchao Jing, Daniel McDonald, et al.European Journal of Nutrition|April 11, 2025
Associations of alcohol with the human gut microbiome and prospective health outcomes in the FINRISK 2002 cohortKari Koponen, Daniel McDonald, Pekka Jousilahti, et al.FEMS Microbiology Reviews|April 26, 2008
Species divergence and the measurement of microbial diversityCatherine A Lozupone, Rob KnightBMC Bioinformatics|July 8, 2015
The UniFrac significance test is sensitive to tree topologyCatherine A Lozupone, Rob KnightProceedings of the National Academy of Sciences of the United States of America|June 27, 2007
Global patterns in bacterial diversityCatherine A Lozupone, Rob KnightAnnals of the American Thoracic Society|January 21, 2014
Technology and techniques for microbial ecology via DNA sequencingWilliam A Walters, Rob KnightCell Metabolism|March 12, 2013
Xenobiotics and the human gut microbiome: metatranscriptomics reveal the active playersLuke K Ursell, Rob KnightMsystems|December 8, 2022
Effects of Variation in Urine Sample Storage Conditions on 16S Urogenital Microbiome AnalysesTanya Kumar, MacKenzie Bryant, Kalen Cantrell, et al.Scientific Reports|October 11, 2024
Differential gut microbiota composition in β-Thalassemia patients and its correlation with iron overloadPoochit Nonejuie, Alisa Wilantho, Daniel McDonald, et al.Pageof 102