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Biorxiv : the Preprint Server for Biology|December 25, 2025
Functional characterization of DNAAF3-AS1 in chromatin remodeling and H3K36me3 distributionAnna Budkina, Anatoliy Zubritskiy, Jude Aneke, et al.International Journal of Molecular Sciences|April 13, 2023
Epi-Impute: Single-Cell RNA-seq Imputation via Integration with Single-Cell ATAC-seqMikhail Raevskiy, Vladislav Yanvarev, Sascha Jung, et al.Plos One|October 3, 2014
Promoter analysis reveals globally differential regulation of human long non-coding RNA and protein-coding genesTanvir Alam, Yulia A Medvedeva, Hui Jia, et al.Nucleic Acids Research|November 9, 2022
EpiFactors 2022: expansion and enhancement of a curated database of human epigenetic factors and complexesDaria Marakulina, Ilya E Vorontsov, Ivan V Kulakovskiy, et al.Frontiers in Immunology|November 27, 2025
CHASERR-CHD2 dynamics in T cell quiescence and its modulation by cyclosporineAnna Budkina, Anatoliy Zubritskiy, Daria Marakulina, et al.Cell Death & Disease|August 18, 2021
A Catalogus Immune Muris of the mouse immune responses to diverse pathogensCéline Barlier, Diego Barriales, Alexey Samosyuk, et al.Journal of Biomolecular Structure & Dynamics|July 19, 2012
Identification of self-consistent modulons from bacterial microarray expression data with the help of structured regulon gene setsElizaveta A Permina, Yulia A Medvedeva, Pia M Baeck, et al.NAR Genomics and Bioinformatics|August 30, 2021
Computational analysis of sense-antisense chimeric transcripts reveals their potential regulatory features and the landscape of expression in human cellsSumit Mukherjee, Rajesh Detroja, Deepak Balamurali, et al.Gigascience|April 8, 2026
NEXT-scASV: A Nextflow Pipeline for Allele-Specific Variants Calling from single cell RNA-seq dataAndrey Shevtsov, Andrey Buyan, Vladimir Nozdrin, et al.Frontiers in Genetics|June 7, 2012
Mutations and binding sites of human transcription factorsFrederick Kinyua Kamanu, Yulia A Medvedeva, Ulf Schaefer, et al.Pageof 5