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Journal of Chemical Information and Modeling|August 2, 2013
Kernel-based partial least squares: application to fingerprint-based QSAR with model visualizationYuling An, Woody Sherman, Steven L DixonBioorganic & Medicinal Chemistry|April 17, 2012
Hole filling and library optimization: application to commercially available fragment librariesYuling An, Woody Sherman, Steven L DixonJournal of Chemical Information and Modeling|August 30, 2011
Rapid shape-based ligand alignment and virtual screening method based on atom/feature-pair similarities and volume overlap scoringG Madhavi Sastry, Steven L Dixon, Woody ShermanJournal of Computer-Aided Molecular Design|November 20, 2014
Exploring conformational search protocols for ligand-based virtual screening and 3-D QSAR modelingDaniel Cappel, Steven L Dixon, Woody Sherman, et al.Journal of Molecular Graphics & Modelling|June 29, 2010
Analysis and comparison of 2D fingerprints: insights into database screening performance using eight fingerprint methodsJianxin Duan, Steven L Dixon, Jeffrey F Lowrie, et al.Journal of Chemical Information and Modeling|May 11, 2010
Large-scale systematic analysis of 2D fingerprint methods and parameters to improve virtual screening enrichmentsMadhavi Sastry, Jeffrey F Lowrie, Steven L Dixon, et al.Future Medicinal Chemistry|September 20, 2016
AutoQSAR: an automated machine learning tool for best-practice quantitative structure-activity relationship modelingSteven L Dixon, Jianxin Duan, Ethan Smith, et al.The Journal of Physical Chemistry. B|June 6, 2023
Comprehensive Approach to Simulating Large Scale Conformational Changes in Biological Systems Utilizing a Path Collective Variable and New Barrier RestraintIstván Kolossváry, Woody ShermanChemical Biology & Drug Design|April 4, 2008
Novel method for probing the specificity binding profile of ligands: applications to HIV proteaseWoody Sherman, Bruce TidorJournal of Chemical Information and Modeling|November 6, 2012
Current assessment of docking into GPCR crystal structures and homology models: successes, challenges, and guidelinesThijs Beuming, Woody ShermanPageof 13