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Biophysical Journal|March 16, 2017
Rotation Mechanism of Molecular Motor V<sub>1</sub>-ATPase Studied by Multiscale Molecular Dynamics SimulationYuta Isaka, Toru Ekimoto, Yuichi Kokabu, et al.Nature Communications|May 15, 2021
Exploring ligand binding pathways on proteins using hypersound-accelerated molecular dynamicsMitsugu Araki, Shigeyuki Matsumoto, Gert-Jan Bekker, et al.Biophysical Journal|July 19, 2020
E487K-Induced Disorder in Functionally Relevant Dynamics of Mitochondrial Aldehyde Dehydrogenase 2Shigeyuki Matsumoto, Mitsugu Araki, Yuta Isaka, et al.Journal of Chemical Information and Modeling|May 30, 2020
Coarse-Grained Diffraction Template Matching Model to Retrieve Multiconformational Models for Biomolecule Structures from Noisy Diffraction PatternsAtsushi Tokuhisa, Ryo Kanada, Shuntaro Chiba, et al.Scientific Reports|February 9, 2020
Improvement in predicting drug sensitivity changes associated with protein mutations using a molecular dynamics based alchemical mutation methodFumie Ono, Shuntaro Chiba, Yuta Isaka, et al.Journal of Chemical Information and Modeling|July 9, 2021
Structure-Based <i>de Novo</i> Molecular Generator Combined with Artificial Intelligence and Docking SimulationsBiao Ma, Kei Terayama, Shigeyuki Matsumoto, et al.Cellular Oncology (Dordrecht, Netherlands)|January 8, 2022
Integrated approach to functional analysis of an ERBB2 variant of unknown significance detected by a cancer gene panel testYohei Harada, Akemi Sato, Mitsugu Araki, et al.Journal of the American Chemical Society|October 12, 2024
Molecular Dynamics Unveils Multiple-Site Binding of Inhibitors with Reduced Activity on the Surface of Dihydrofolate ReductaseMitsugu Araki, Toru Ekimoto, Kazuhiro Takemura, et al.The Journal of Biological Chemistry|December 27, 2024
Receptor-independent regulation of Gα13 by alpha-1-antitrypsin C-terminal peptidesYonghak Park, Shigeyuki Matsumoto, Kosuke Ogata, et al.Nature|June 5, 2020
Landscape and function of multiple mutations within individual oncogenesYuki Saito, Junji Koya, Mitsugu Araki, et al.Pageof 2