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Nucleic Acids Research|June 25, 2004
MotifViz: an analysis and visualization tool for motif discoveryYutao Fu, Martin C Frith, Peter M Haverty, et al.
Nucleic Acids Research|June 25, 2004
CARRIE web service: automated transcriptional regulatory network inference and interactive analysisPeter M Haverty, Martin C Frith, Zhiping Weng
Bioinformatics (Oxford, England)|March 6, 2004
CisML: an XML-based format for sequence motif detection softwarePeter M Haverty, Zhiping Weng
Nucleic Acids Research|February 28, 2004
Detection of functional DNA motifs via statistical over-representationMartin C Frith, Yutao Fu, Liqun Yu, et al.
Genome Informatics. International Conference on Genome Informatics|December 20, 2005
Improvement of TRANSFAC matrices using multiple local alignment of transcription factor binding site sequencesYutao Fu, Zhiping Weng
Nucleic Acids Research|January 6, 2004
Computational inference of transcriptional regulatory networks from expression profiling and transcription factor binding site identificationPeter M Haverty, Ulla Hansen, Zhiping Weng
Nucleic Acids Research|June 26, 2003
Cluster-Buster: Finding dense clusters of motifs in DNA sequencesMartin C Frith, Michael C Li, Zhiping Weng
Bioinformatics (Oxford, England)|February 14, 2004
Site2genome: locating short DNA sequences in whole genomesMartin C Frith, Anason S Halees, Ulla Hansen, et al.
Nucleic Acids Research|January 6, 2004
Finding functional sequence elements by multiple local alignmentMartin C Frith, Ulla Hansen, John L Spouge, et al.
Nucleic Acids Research|July 24, 2002
Statistical significance of clusters of motifs represented by position specific scoring matrices in nucleotide sequencesMartin C Frith, John L Spouge, Ulla Hansen, et al.
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