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Bioinformatics (Oxford, England)|December 23, 2020
High-throughput modeling and scoring of TCR-pMHC complexes to predict cross-reactive peptidesTyler Borrman, Brian G Pierce, Thom Vreven, et al.Elife|August 31, 2021
YAP and TAZ are transcriptional co-activators of AP-1 proteins and STAT3 during breast cellular transformationLizhi He, Henry Pratt, Mingshi Gao, et al.Proteins|January 30, 2020
Performance of ZDOCK and IRAD in CAPRI rounds 39-45Thom Vreven, Sweta Vangaveti, Tyler M Borrman, et al.BMC Genomics|July 14, 2018
Elimination of PCR duplicates in RNA-seq and small RNA-seq using unique molecular identifiersYu Fu, Pei-Hsuan Wu, Timothy Beane, et al.Genome Informatics. International Conference on Genome Informatics|February 16, 2005
Gene expression module discovery using gibbs samplingChang-Jiun Wu, Yutao Fu, T M Murali, et al.Gigascience|January 29, 2019
NanoPipe-a web server for nanopore MinION sequencing data analysisVictoria Shabardina, Tabea Kischka, Felix Manske, et al.Scientific Reports|October 25, 2024
Targeted nanopore sequencing using the Flongle device to identify mitochondrial DNA variantsShintaro Akamatsu, Satomi Mitsuhashi, Kaima Soga, et al.Genome Biology|October 16, 2014
MBASED: allele-specific expression detection in cancer tissues and cell linesOleg Mayba, Houston N Gilbert, Jinfeng Liu, et al.RNA (New York, N.Y.)|November 26, 2010
Target RNA-directed tailing and trimming purifies the sorting of endo-siRNAs between the two Drosophila Argonaute proteinsStefan L Ameres, Jui-Hung Hung, Jia Xu, et al.Human Molecular Genetics|September 9, 2022
Building integrative functional maps of gene regulationJinrui Xu, Henry E Pratt, Jill E Moore, et al.Pageof 48