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Trends in Microbiology|March 28, 2007
Putative type IV secretion genes in Bacillus anthracisMarcin Grynberg, Zhanwen Li, Ewa Szczurek, et al.Protein Science : a Publication of the Protein Society|June 28, 2022
What the protein data bank tells us about the evolutionary conservation of protein conformational diversityMallika Iyer, Lukasz Jaroszewski, Mayya Sedova, et al.The CRISPR Journal|March 2, 2019
CRISPRs for Strain Tracking and Their Application to Microbiota Transplantation Data AnalysisTony J Lam, Yuzhen YeScientific Reports|October 19, 2022
Meta-analysis of microbiome association networks reveal patterns of dysbiosis in diseased microbiomesTony J Lam, Yuzhen YePlos Computational Biology|August 15, 2009
A parsimony approach to biological pathway reconstruction/inference for genomes and metagenomesYuzhen Ye, Thomas G DoakBMC Genomics|July 11, 2019
Long reads reveal the diversification and dynamics of CRISPR reservoir in microbiomesTony J Lam, Yuzhen YeBMC Bioinformatics|February 27, 2024
Protein embedding based alignmentBenjamin Giovanni Iovino, Yuzhen YeJournal of Computer Science and Technology|September 28, 2011
Metagenomics: Facts and Artifacts, and Computational Challenges*John C Wooley, Yuzhen YeJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|March 10, 2011
A novel abundance-based algorithm for binning metagenomic sequences using l-tuplesYu-Wei Wu, Yuzhen YeActa Crystallographica. Section D, Biological Crystallography|June 24, 2004
The importance of alignment accuracy for molecular replacementRobert Schwarzenbacher, Adam Godzik, Slawomir K Grzechnik, et al.Pageof 36