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Mbio|March 10, 2025
The physical biogeography of Fusobacterium nucleatum in health and diseaseJohn P Connolly, Libusha KellyFrontiers in Immunology|October 13, 2025
Higher aged neutrophils and differential inflammatory profiles in sickle cell disease patients on chronic transfusion therapy versus those on hydroxyureaKatrina Terrigno, Zachary N Flamholz, Aakash Mahant Mahant, et al.Microbiology Resource Announcements|July 31, 2026
Isolation and genomic characterization of bacteriophage Vanta, a lytic Yuavirus infecting clinical strains of Pseudomonas aeruginosaAaryan Harshith, Zachary N Flamholz, Paul L Bollyky, et al.Annual Review of Pharmacology and Toxicology|October 13, 2020
Engineering the Microbiome to Prevent Adverse Events: Challenges and OpportunitiesSaad Khan, Ruth Hauptman, Libusha KellyElife|June 12, 2019
The human gut chemical landscape predicts microbe-mediated biotransformation of foods and drugsLeah Guthrie, Sarah Wolfson, Libusha KellyPacific Symposium on Biocomputing. Pacific Symposium on Biocomputing|November 10, 2007
Protein interactions and disease phenotypes in the ABC transporter superfamilyLibusha Kelly, Rachel Karchin, Andrej SaliMicrobiology Resource Announcements|July 31, 2026
Isolation and genomic characterization of bacteriophage Luminis, a lytic Yuavirus infecting clinical strains of Pseudomonas aeruginosaAaryan Harshith, Zachary N Flamholz, Paul L Bollyky, et al.NPJ Biofilms and Microbiomes|October 15, 2020
Topological analysis reveals state transitions in human gut and marine bacterial communitiesWilliam K Chang, David VanInsberghe, Libusha KellyJournal of Biomedical Informatics|December 17, 2021
Word embeddings trained on published case reports are lightweight, effective for clinical tasks, and free of protected health informationZachary N Flamholz, Andrew Crane-Droesch, Lyle H Ungar, et al.NPJ Biofilms and Microbiomes|November 7, 2017
Human microbiome signatures of differential colorectal cancer drug metabolismLeah Guthrie, Sanchit Gupta, Johanna Daily, et al.Pageof 7