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Physical Biology|June 21, 2023
Bayesian filtering for model predictive control of stochastic gene expression in single cellsZachary R Fox, Gregory Batt, Jakob RuessEpidemics|January 14, 2021
To quarantine, or not to quarantine: A theoretical framework for disease control via contact tracingDavin Lunz, Gregory Batt, Jakob RuessNature Communications|October 6, 2021
A light tunable differentiation system for the creation and control of consortia in yeastChetan Aditya, François Bertaux, Gregory Batt, et al.Proceedings of the National Academy of Sciences of the United States of America|March 10, 2022
Using single-cell models to predict the functionality of synthetic circuits at the population scaleChetan Aditya, François Bertaux, Gregory Batt, et al.Plos Computational Biology|March 18, 2022
Parameter inference for stochastic biochemical models from perturbation experiments parallelised at the single cell levelAnđela Davidović, Remy Chait, Gregory Batt, et al.Plos Computational Biology|July 28, 2021
Beyond the chemical master equation: Stochastic chemical kinetics coupled with auxiliary processesDavin Lunz, Gregory Batt, Jakob Ruess, et al.Nature Communications|April 23, 2022
Enabling reactive microscopy with MicroMatorZachary R Fox, Steven Fletcher, Achille Fraisse, et al.The Journal of Chemical Physics|January 3, 2016
Minimal moment equations for stochastic models of biochemical reaction networks with partially finite state spaceJakob RuessMathematical Biosciences|February 6, 2026
A partition method for bounding continuous-time Markov chain models of general reaction networkGuillaume Ballif, Laurent Pfeiffer, Jakob RuessThe Journal of Chemical Physics|November 8, 2023
Stochastic chemical kinetics of cell fate decision systems: From single cells to populations and backJakob Ruess, Guillaume Ballif, Chetan AdityaPageof 6