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Genome Biology
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October 8, 2021
Global properties of regulatory sequences are predicted by transcription factor recognition mechanisms
Zain M Patel, Timothy R Hughes
Biorxiv : the Preprint Server for Biology
|
December 11, 2023
Benchmarking computational methods to identify spatially variable genes and peaks
Zhijian Li, Zain M Patel, Dongyuan Song, et al.
Genetics
|
May 13, 2022
Reconstruction of full-length LINE-1 progenitors from ancestral genomes
Laura F Campitelli, Isaac Yellan, Mihai Albu, et al.
Genome Biology
|
September 19, 2025
Systematic benchmarking of computational methods to identify spatially variable genes
Zhijian Li, Zain M Patel, Dongyuan Song, et al.
Biorxiv : the Preprint Server for Biology
|
September 24, 2024
CRISPR-CLEAR: Nucleotide-Resolution Mapping of Regulatory Elements via Allelic Readout of Tiled Base Editing
Basheer Becerra, Sandra Wittibschlager, Zain M Patel, et al.
Genome Research
|
June 6, 2025
Multi-species analysis of inflammatory response elements reveals ancient and lineage-specific contributions of transposable elements to NF-kB binding
Liangxi Wang, Tiegh Taylor, Kumaragurubaran Rathnakumar, et al.
Nature Communications
|
March 2, 2026
Nucleotide-resolution mapping of regulatory elements via allelic readout of tiled base editing
Basheer Becerra, Sandra Wittibschlager, Zain M Patel, et al.
Biorxiv : the Preprint Server for Biology
|
November 28, 2024
Extensive binding of uncharacterized human transcription factors to genomic dark matter
Rozita Razavi, Ali Fathi, Isaac Yellan, et al.
Biorxiv : the Preprint Server for Biology
|
November 28, 2024
Perspectives on Codebook: sequence specificity of uncharacterized human transcription factors
Arttu Jolma, Kaitlin U Laverty, Ali Fathi, et al.
Communications Biology
|
November 7, 2025
Cross-platform motif discovery and benchmarking to explore binding specificities of poorly studied human transcription factors
Ilya E Vorontsov, Ivan Kozin, Sergey Abramov, et al.
Page
of 2
Search research articles
Search
Showing results (1-10 of 11) with videos related to
Sort By:
Page
of 2
Genome Biology
|
October 8, 2021
Global properties of regulatory sequences are predicted by transcription factor recognition mechanisms
Zain M Patel, Timothy R Hughes
Biorxiv : the Preprint Server for Biology
|
December 11, 2023
Benchmarking computational methods to identify spatially variable genes and peaks
Zhijian Li, Zain M Patel, Dongyuan Song, et al.
Genetics
|
May 13, 2022
Reconstruction of full-length LINE-1 progenitors from ancestral genomes
Laura F Campitelli, Isaac Yellan, Mihai Albu, et al.
Genome Biology
|
September 19, 2025
Systematic benchmarking of computational methods to identify spatially variable genes
Zhijian Li, Zain M Patel, Dongyuan Song, et al.
Biorxiv : the Preprint Server for Biology
|
September 24, 2024
CRISPR-CLEAR: Nucleotide-Resolution Mapping of Regulatory Elements via Allelic Readout of Tiled Base Editing
Basheer Becerra, Sandra Wittibschlager, Zain M Patel, et al.
Genome Research
|
June 6, 2025
Multi-species analysis of inflammatory response elements reveals ancient and lineage-specific contributions of transposable elements to NF-kB binding
Liangxi Wang, Tiegh Taylor, Kumaragurubaran Rathnakumar, et al.
Nature Communications
|
March 2, 2026
Nucleotide-resolution mapping of regulatory elements via allelic readout of tiled base editing
Basheer Becerra, Sandra Wittibschlager, Zain M Patel, et al.
Biorxiv : the Preprint Server for Biology
|
November 28, 2024
Extensive binding of uncharacterized human transcription factors to genomic dark matter
Rozita Razavi, Ali Fathi, Isaac Yellan, et al.
Biorxiv : the Preprint Server for Biology
|
November 28, 2024
Perspectives on Codebook: sequence specificity of uncharacterized human transcription factors
Arttu Jolma, Kaitlin U Laverty, Ali Fathi, et al.
Communications Biology
|
November 7, 2025
Cross-platform motif discovery and benchmarking to explore binding specificities of poorly studied human transcription factors
Ilya E Vorontsov, Ivan Kozin, Sergey Abramov, et al.
Page
of 2