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F1000Research|November 13, 2014
Developing sustainable software solutions for bioinformatics by the " Butterfly" paradigmZeeshan Ahmed, Saman Zeeshan, Thomas DandekarDatabase : the Journal of Biological Databases and Curation|August 20, 2016
Mining biomedical images towards valuable information retrieval in biomedical and life sciencesZeeshan Ahmed, Saman Zeeshan, Thomas DandekarF1000Research|June 12, 2015
Ant-App-DB: a smart solution for monitoring arthropods activities, experimental data management and solar calculations without GPS in behavioral field studiesZeeshan Ahmed, Saman Zeeshan, Pauline Fleischmann, et al.Bioinformatics (Oxford, England)|December 1, 2014
Lipid-Pro: a computational lipid identification solution for untargeted lipidomics on data-independent acquisition tandem mass spectrometry platformsZeeshan Ahmed, Michel Mayr, Saman Zeeshan, et al.BMC Bioinformatics|July 11, 2013
Software LS-MIDA for efficient mass isotopomer distribution analysis in metabolic modellingZeeshan Ahmed, Saman Zeeshan, Claudia Huber, et al.F1000Research|May 9, 2018
MSL: Facilitating automatic and physical analysis of published scientific literature in PDF formatZeeshan Ahmed, Thomas DandekarHuman Genomics|November 14, 2021
RNA-seq driven expression and enrichment analysis to investigate CVD genes with associated phenotypes among high-risk heart failure patientsZeeshan Ahmed, Saman Zeeshan, Bruce T LiangDatabase : the Journal of Biological Databases and Curation|September 11, 2014
'Isotopo' a database application for facile analysis and management of mass isotopomer dataZeeshan Ahmed, Saman Zeeshan, Claudia Huber, et al.Peerj|August 16, 2021
Genomics pipelines to investigate susceptibility in whole genome and exome sequenced data for variant discovery, annotation, prediction and genotypingZeeshan Ahmed, Eduard Gibert Renart, Saman ZeeshanPersonalized Medicine|March 9, 2022
Investigating underlying human immunity genes, implicated diseases and their relationship to COVID-19Zeeshan Ahmed, Eduard Gibert Renart, Saman ZeeshanPageof 55