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Bioinformatics Advances|January 26, 2023
MODalyseR-a novel software for inference of disease module hub regulators identified a putative multiple sclerosis regulator supported by independent eQTL dataHendrik A de Weerd, Julia Åkesson, Dimitri Guala, et al.
BMC Cancer|August 14, 2012
The mitochondrial transporter SLC25A43 is frequently deleted and may influence cell proliferation in HER2-positive breast tumorsElisabet Tina, Breezy Malakkaran Lindqvist, Marike Gabrielson, et al.
Cancer Genetics and Cytogenetics|September 30, 2010
Validation of suitable endogenous control genes for expression studies of miRNA in prostate cancer tissuesJessica Carlsson, Gisela Helenius, Mats Karlsson, et al.
Cancer Cell International|May 31, 2011
A miRNA expression signature that separates between normal and malignant prostate tissuesJessica Carlsson, Sabina Davidsson, Gisela Helenius, et al.
Bioinformatics (Oxford, England)|February 5, 2019
Batch-normalization of cerebellar and medulloblastoma gene expression datasets utilizing empirically defined negative control genesHolger Weishaupt, Patrik Johansson, Anders Sundström, et al.
Patterns (New York, N.Y.)|November 21, 2024
Latent space arithmetic on data embeddings from healthy multi-tissue human RNA-seq decodes disease modulesHendrik A de Weerd, Dimitri Guala, Mika Gustafsson, et al.
Bioinformatics (Oxford, England)|April 10, 2020
MODifieR: an Ensemble R Package for Inference of Disease Modules from Transcriptomics NetworksHendrik A de Weerd, Tejaswi V S Badam, David Martínez-Enguita, et al.
Translational Oncology|July 17, 2024
Multi-omics profiling to identify early plasma biomarkers in pre-diagnostic pancreatic ductal adenocarcinoma: a nested case-control studyEmmy Borgmästars, Benjamin Ulfenborg, Mattias Johansson, et al.
BMC Genomics|August 31, 2021
A validated generally applicable approach using the systematic assessment of disease modules by GWAS reveals a multi-omic module strongly associated with risk factors in multiple sclerosisTejaswi V S Badam, Hendrik A de Weerd, David Martínez-Enguita, et al.
Journal of Gastrointestinal Oncology|May 17, 2024
Metabolomics for early pancreatic cancer detection in plasma samples from a Swedish prospective population-based biobankEmmy Borgmästars, Sara Jacobson, Maja Simm, et al.
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