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Computers in Biology and Medicine|October 5, 2025
Correlated latent space learning for structural differentiation modeling in single cell RNA dataZeyu Fu, Chunlin ChenBiology|June 26, 2025
scRL: Utilizing Reinforcement Learning to Evaluate Fate Decisions in Single-Cell DataZeyu Fu, Chunlin Chen, Song Wang, et al.BMC Biology|July 14, 2025
iVAE: an interpretable representation learning framework enhances clustering performance for single-cell dataZeyu Fu, Chunlin Chen, Song Wang, et al.BMC Genomics|August 21, 2025
GNODEVAE: a graph-based ODE-VAE enhances clustering for single-cell dataZeyu Fu, Chunlin Chen, Song Wang, et al.Communications Biology|March 3, 2026
iAODE for benchmarking and continuum modeling of single-cell chromatin accessibilityZeyu Fu, Chunlin Chen, Song Wang, et al.Frontiers in Genetics|January 20, 2026
Lorentz-regularized interpretable VAE for multi-scale single-cell transcriptomic and epigenomic embeddingsZeyu Fu, Jiawei Fu, Chunlin Chen, et al.Frontiers in Genetics|June 23, 2026
LAIOR: a hyperbolic neural ODE variational framework for interpretable single-cell manifold learning and trajectory inferenceZeyu Fu, Jiawei Fu, Keyang Zhang, et al.Frontiers in Genetics|June 30, 2026
scCCVGBen for benchmarking of single-cell representation learning anchored on a centroid-coupled variational graph attention autoencoder across scRNA-seq and scATAC-seqZeyu Fu, Jiawei Fu, Chunlin Chen, et al.Computational and Structural Biotechnology Journal|June 16, 2025
scFocus: Detecting branching probabilities in single-cell data with SACChunlin Chen, Zeyu Fu, Jiajia Yang, et al.Microbial Pathogenesis|January 29, 2023
The role of lactic acid bacteria in maintaining vaginal internal environment homeostasis in patients with infertilityJun Lan, Chunlin ChenPageof 38