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Journal of Computer-Aided Molecular Design
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August 11, 2020
SAMPL7 TrimerTrip host-guest binding poses and binding affinities from spherical-coordinates-biased simulations
Zhaoxi Sun
Physical Chemistry Chemical Physics : PCCP
|
September 26, 2019
BAR-based multi-dimensional nonequilibrium pulling for indirect construction of QM/MM free energy landscapes: from semi-empirical to ab initio
Zhaoxi Sun
Physical Chemistry Chemical Physics : PCCP
|
March 22, 2019
Understanding PIM-1 kinase inhibitor interactions with free energy simulation
Xiaohui Wang, Zhaoxi Sun
Physical Chemistry Chemical Physics : PCCP
|
March 30, 2022
Seeding the multi-dimensional nonequilibrium pulling for Hamiltonian variation: indirect nonequilibrium free energy simulations at QM levels
Zhaoxi Sun, Qiaole He
Journal of Chemical Information and Modeling
|
May 25, 2019
Determination of Base-Flipping Free-Energy Landscapes from Nonequilibrium Stratification
Xiaohui Wang, Zhaoxi Sun
Physical Chemistry Chemical Physics : PCCP
|
July 11, 2024
Methodological and force field effects in the molecular dynamics-based prediction of binding free energies of host-guest systems
Zhaoxi Sun, Piero Procacci
Journal of Chemical Information and Modeling
|
December 14, 2020
Binding Thermodynamics and Interaction Patterns of Inhibitor-Major Urinary Protein-I Binding from Extensive Free-Energy Calculations: Benchmarking AMBER Force Fields
Zhe Huai, Zhaoxi Shen, Zhaoxi Sun
Journal of Molecular Modeling
|
December 14, 2018
Thermodynamics of helix formation in small peptides of varying length in vacuo, in implicit solvent, and in explicit solvent
Xiaohui Wang, Boming Deng, Zhaoxi Sun
Journal of Computer-Aided Molecular Design
|
March 24, 2021
Binding thermodynamics and interaction patterns of human purine nucleoside phosphorylase-inhibitor complexes from extensive free energy calculations
Zhe Huai, Huaiyu Yang, Zhaoxi Sun
Journal of Chemical Information and Modeling
|
June 24, 2017
Extensive Assessment of Various Computational Methods for Aspartate's pK<sub>a</sub> Shift
Zhaoxi Sun, Xiaohui Wang, Jianing Song
Page
of 5
Search research articles
Search
Showing results (1-10 of 50) with videos related to
Sort By:
Page
of 5
Journal of Computer-Aided Molecular Design
|
August 11, 2020
SAMPL7 TrimerTrip host-guest binding poses and binding affinities from spherical-coordinates-biased simulations
Zhaoxi Sun
Physical Chemistry Chemical Physics : PCCP
|
September 26, 2019
BAR-based multi-dimensional nonequilibrium pulling for indirect construction of QM/MM free energy landscapes: from semi-empirical to ab initio
Zhaoxi Sun
Physical Chemistry Chemical Physics : PCCP
|
March 22, 2019
Understanding PIM-1 kinase inhibitor interactions with free energy simulation
Xiaohui Wang, Zhaoxi Sun
Physical Chemistry Chemical Physics : PCCP
|
March 30, 2022
Seeding the multi-dimensional nonequilibrium pulling for Hamiltonian variation: indirect nonequilibrium free energy simulations at QM levels
Zhaoxi Sun, Qiaole He
Journal of Chemical Information and Modeling
|
May 25, 2019
Determination of Base-Flipping Free-Energy Landscapes from Nonequilibrium Stratification
Xiaohui Wang, Zhaoxi Sun
Physical Chemistry Chemical Physics : PCCP
|
July 11, 2024
Methodological and force field effects in the molecular dynamics-based prediction of binding free energies of host-guest systems
Zhaoxi Sun, Piero Procacci
Journal of Chemical Information and Modeling
|
December 14, 2020
Binding Thermodynamics and Interaction Patterns of Inhibitor-Major Urinary Protein-I Binding from Extensive Free-Energy Calculations: Benchmarking AMBER Force Fields
Zhe Huai, Zhaoxi Shen, Zhaoxi Sun
Journal of Molecular Modeling
|
December 14, 2018
Thermodynamics of helix formation in small peptides of varying length in vacuo, in implicit solvent, and in explicit solvent
Xiaohui Wang, Boming Deng, Zhaoxi Sun
Journal of Computer-Aided Molecular Design
|
March 24, 2021
Binding thermodynamics and interaction patterns of human purine nucleoside phosphorylase-inhibitor complexes from extensive free energy calculations
Zhe Huai, Huaiyu Yang, Zhaoxi Sun
Journal of Chemical Information and Modeling
|
June 24, 2017
Extensive Assessment of Various Computational Methods for Aspartate's pK<sub>a</sub> Shift
Zhaoxi Sun, Xiaohui Wang, Jianing Song
Page
of 5