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Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|February 2, 2023
Reads2Vec: Efficient Embedding of Raw High-Throughput Sequencing Reads DataPrakash Chourasia, Sarwan Ali, Simone Ciccolella, et al.Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|October 26, 2021
Simpler and Faster Development of Tumor Phylogeny PipelinesSarwan Ali, Simone Ciccolella, Lorenzo Lucarella, et al.Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|April 17, 2026
DANCE: Deep Learning-Assisted Analysis of ProteiN Sequences Using Chaos Enhanced Kaleidoscopic ImagesTaslim Murad, Prakash Chourasia, Sarwan Ali, et al.Scientific Reports|March 14, 2023
Benchmarking machine learning robustness in Covid-19 genome sequence classificationSarwan Ali, Bikram Sahoo, Alexander Zelikovsky, et al.Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|February 20, 2026
Uncovering Epistatic Interactions in SARS-CoV-2 Evolution Through Hidden Markov ModelsAyotomiwa Ezekiel Adeniyi, Akshay Juyal, Pavel Skums, et al.Biomolecules|June 28, 2023
Assessing the Resilience of Machine Learning Classification Algorithms on SARS-CoV-2 Genome Sequences Generated with Long-Read Specific ErrorsBikram Sahoo, Sarwan Ali, Pin-Yu Chen, et al.IEEE/ACM Transactions on Computational Biology and Bioinformatics|February 18, 2016
Searching Genome-Wide Multi-Locus Associations for Multiple Diseases Based on Bayesian InferenceXuan Guo, Jing Zhang, Zhipeng Cai, et al.BMC Bioinformatics|February 12, 2009
ComPhy: prokaryotic composite distance phylogenies inferred from whole-genome gene setsGuan Ning Lin, Zhipeng Cai, Guohui Lin, et al.Journal of Healthcare Engineering|March 31, 2018
A Digital Compressed Sensing-Based Energy-Efficient Single-Spot Bluetooth ECG NodeKan Luo, Zhipeng Cai, Keqin Du, et al.Medical & Biological Engineering & Computing|January 2, 2021
Over-fitting suppression training strategies for deep learning-based atrial fibrillation detectionXiangyu Zhang, Jianqing Li, Zhipeng Cai, et al.Pageof 304