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NAR Genomics and Bioinformatics|September 8, 2023
SUPREME: multiomics data integration using graph convolutional networksZiynet Nesibe Kesimoglu, Serdar BozdagScientific Reports|November 24, 2024
Fusing multiplex heterogeneous networks using graph attention-aware fusion networksZiynet Nesibe Kesimoglu, Serdar BozdagPlos One|May 13, 2021
Crinet: A computational tool to infer genome-wide competing endogenous RNA (ceRNA) interactionsZiynet Nesibe Kesimoglu, Serdar BozdagScientific Reports|April 11, 2025
Computational inference of co-regulatory modules from transcription factors, MicroRNAs, and their targets using CanMod2Ziynet Nesibe Kesimoglu, Jubair Ibn Malik Rifat, Serdar BozdagThe Journal of Arthroplasty|November 18, 2021
The Impact of Pre-Operative Healthcare Utilization on Complications, Readmissions, and Post-Operative Healthcare Utilization Following Total Joint ArthroplastyAshley E Creager, Andrew D Kleven, Ziynet Nesibe Kesimoglu, et al.The Journal of Arthroplasty|December 26, 2021
Do In-Hospital Rothman Index Scores Predict Postdischarge Adverse Events and Discharge Location After Total Knee Arthroplasty?Andrew D Kleven, Austin H Middleton, Ziynet Nesibe Kesimoglu, et al.Biorxiv : the Preprint Server for Biology|April 29, 2026
Combined inference of known and novel mutational signatures with ReDeNovoZiynet Nesibe Kesimoglu, Ermin Hodzic, Jan Hoinka, et al.Biorxiv : the Preprint Server for Biology|February 20, 2025
Top-DTI: Integrating Topological Deep Learning and Large Language Models for Drug Target Interaction PredictionMuhammed Talo, Serdar BozdagPlos Computational Biology|July 17, 2018
Cancerin: A computational pipeline to infer cancer-associated ceRNA interaction networksDuc Do, Serdar BozdagBioinformatics (Oxford, England)|July 15, 2025
Top-DTI: integrating topological deep learning and large language models for drug-target interaction predictionMuhammed Talo, Serdar BozdagPageof 7