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BMC Bioinformatics|March 10, 2011
compomics-utilities: an open-source Java library for computational proteomicsHarald Barsnes, Marc Vaudel, Niklaas Colaert, et al.BMC Bioinformatics|March 8, 2011
MIR@NT@N: a framework integrating transcription factors, microRNAs and their targets to identify sub-network motifs in a meta-regulation network modelAntony Le Béchec, Elodie Portales-Casamar, Guillaume Vetter, et al.BMC Bioinformatics|August 3, 2011
Link-based quantitative methods to identify differentially coexpressed genes and gene pairsHui Yu, Bao-Hong Liu, Zhi-Qiang Ye, et al.BMC Bioinformatics|August 10, 2011
NETGEM: Network Embedded Temporal GEnerative Model for gene expression dataVinay Jethava, Chiranjib Bhattacharyya, Devdatt Dubhashi, et al.BMC Bioinformatics|August 4, 2011
GSV: a web-based genome synteny viewer for customized dataKashi V Revanna, Chi-Chen Chiu, Ezekiel Bierschank, et al.BMC Bioinformatics|July 22, 2011
ADAM: analysis of discrete models of biological systems using computer algebraFranziska Hinkelmann, Madison Brandon, Bonny Guang, et al.BMC Bioinformatics|July 16, 2011
S3QL: a distributed domain specific language for controlled semantic integration of life sciences dataHelena F Deus, Miriã C Correa, Romesh Stanislaus, et al.BMC Bioinformatics|July 9, 2011
An integrated ChIP-seq analysis platform with customizable workflowsEugenia G Giannopoulou, Olivier ElementoBMC Bioinformatics|July 9, 2011
ReadDB provides efficient storage for mapped short readsP Alexander Rolfe, David K GiffordBMC Bioinformatics|July 13, 2011
Detection of fused genes in eukaryotic genomes using gene deFuser: analysis of the Tetrahymena thermophila genomeHannah M W Salim, Amanda M Koire, Nicholas A Stover, et al.Pageof 1,248