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BMC Bioinformatics|June 4, 2026
CB-Search: a method for searching for similar protein motifs with biased compositionsPatryk JarnotBMC Bioinformatics|June 4, 2026
Tissueformer: extending single-cell foundation models to predict population-level phenotypesAri S Benjamin, Anthony ZadorBMC Bioinformatics|May 5, 2026
GEO uploader: simplifying the data deposition in the GEO repositoryRonald Domi, Falko Noé, Peter Leary, et al.BMC Bioinformatics|May 4, 2026
ShadowVIMP: permutation-based multiple testing-controlled variable selectionTim Müller, Roman Hornung, Silke Szymczak, et al.BMC Bioinformatics|February 25, 2026
Robust graph structure learning to improve multi-omics cancer subtype classificationMengke Guo, Xiucai Ye, Tetsuya SakuraiBMC Bioinformatics|March 18, 2026
BKDRP: a biological knowledge-driven approach for drug response prediction using multi-omics data in cancer cell linesKoyel Mandal, Sanghamitra BandyopadhyayBMC Bioinformatics|March 18, 2026
SCW: building the whole-genome 3D structures based on extremely sparse single-cell Hi-C dataHao Zhu, Tong Liu, Bishal Shrestha, et al.BMC Bioinformatics|May 26, 2025
CRISP: correlation-refined image segmentation processJennifer K Briggs, Erli Jin, Matthew J Merrins, et al.BMC Bioinformatics|September 20, 2008
An iterative block-shifting approach to retention time alignment that preserves the shape and area of gas chromatography-mass spectrometry peaksMinho Chae, Robert J Shmookler Reis, John J ThadenBMC Bioinformatics|March 19, 2010
Correcting for the effects of natural abundance in stable isotope resolved metabolomics experiments involving ultra-high resolution mass spectrometryHunter Nb MoseleyPageof 1,249