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BMC Bioinformatics|April 30, 2025
M3S-GRPred: a novel ensemble learning approach for the interpretable prediction of glucocorticoid receptor antagonists using a multi-step stacking strategyNalini Schaduangrat, Hathaichanok Chuntakaruk, Thanyada Rungrotmongkol, et al.BMC Bioinformatics|April 18, 2025
GRLGRN: graph representation-based learning to infer gene regulatory networks from single-cell RNA-seq dataKai Wang, Yulong Li, Fei Liu, et al.BMC Bioinformatics|April 16, 2025
Phoenics: a novel statistical approach for longitudinal metabolomic pathway analysisCamille Guilmineau, Marie Tremblay-Franco, Nathalie Vialaneix, et al.BMC Bioinformatics|May 5, 2025
M-DeepAssembly: enhanced DeepAssembly based on multi-objective multi-domain protein conformation samplingXinyue Cui, Yuhao Xia, Minghua Hou, et al.BMC Bioinformatics|June 17, 2025
PRCFX-DT: a new graph-based approach for feature selection and classification of genomic sequencesAmin Khodaei, Sania Eskandari, Hadi Sharifi, et al.BMC Bioinformatics|May 20, 2025
The application of compressed sensing on tumor mutation burden calculation from overlapped pooling sequencing dataYue Cui, Yi Qiao, Rongming An, et al.BMC Bioinformatics|May 19, 2025
ProTaxoVis-protein taxonomic visualisation of presenceYin-Chen Hsieh, Mathias Bockwoldt, Ines HeilandBMC Bioinformatics|May 7, 2025
py_ped_sim: a flexible forward pedigree and genetic simulator for complex family pedigree analysisMiguel Guardado, Cynthia Perez, Sthen Campana, et al.BMC Bioinformatics|August 20, 2025
Autoencoders with shared and specific embeddings for multi-omics data integrationChao Wang, Michael J O'ConnellBMC Bioinformatics|January 21, 2026
CRESCENT, a comprehensive RNA-Seq expression, splicing, and coding/non-coding element network toolGilles Sireta, Gwendal Cueff, Vincent Darbot, et al.Pageof 1,246